Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (38)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Riggins, G. J.
Right arrow Articles by Strausberg, R. L.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Riggins, G. J.
Right arrow Articles by Strausberg, R. L.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Human Molecular Genetics, 2001, Vol. 10, No. 7 663-667
© 2001 Oxford University Press

Genome and genetic resources from the Cancer Genome Anatomy Project

Gregory J. Riggins1,+ and Robert L. Strausberg2

1Duke University Medical Center, Durham, NC 27710, USA and 2Cancer Genomics Office, National Cancer Institute, Bethesda, MD 20892, USA

The Cancer Genome Anatomy Project (CGAP) is a collaborative network of cancer researchers with a common goal: to decipher the genetic changes that occur during cancer formation and progression. The project brings together several recent technologies capable of high-throughput analysis to help achieve this goal. Automated sequencing of cDNA libraries is a primary focus and is geared towards providing a comprehensive and annotated set of human and mouse transcribed sequences. This effort includes full-length transcript sequence generated by CGAP’s new Mammalian Gene Collection initiative. Single nucleotide polymorphisms (SNPs) within human gene sequences (Genetic Annotation Initiative) and chromosomal rearrangements within cancer cells (Cancer Chromosome Aberration Project) are also being cataloged as part of CGAP. Finally, to help determine gene expression patterns related to cancer, CGAP provides a quantitative catalog of data through its SAGEmap initiative. The genome and genetic analysis tools listed in this review are all freely distributed by CGAP (http://cgap.nci.nih.gov/) without restriction.

+ To whom correspondence should be addressed. Tel: +1 919 684 3250; Fax: +1 919 681 2796; Email: greg.riggins@duke.edu


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Clin. Cancer Res.Home page
H. Alvarez, A. Corvalan, J. C. Roa, P. Argani, F. Murillo, J. Edwards, R. Beaty, G. Feldmann, S.-M. Hong, M. Mullendore, et al.
Serial Analysis of Gene Expression Identifies Connective Tissue Growth Factor Expression as a Prognostic Biomarker in Gallbladder Cancer
Clin. Cancer Res., May 1, 2008; 14(9): 2631 - 2638.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
D. Karolchik, R. M. Kuhn, R. Baertsch, G. P. Barber, H. Clawson, M. Diekhans, B. Giardine, R. A. Harte, A. S. Hinrichs, F. Hsu, et al.
The UCSC Genome Browser Database: 2008 update
Nucleic Acids Res., January 11, 2008; 36(suppl_1): D773 - D779.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
L. Bianchetti, Y. Wu, E. Guerin, F. Plewniak, and O. Poch
SAGETTARIUS: a program to reduce the number of tags mapped to multiple transcripts and to plan SAGE sequencing stages
Nucleic Acids Res., September 25, 2007; 35(18): e122 - e122.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
E. J. Vallender, J. E. Paschall, C. M. Malcom, B. T. Lahn, and G. J. Wyckoff
SPEED: a molecular-evolution-based database of mammalian orthologous groups
Bioinformatics, November 15, 2006; 22(22): 2835 - 2837.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
T. Matsunaga and M.-a. Muramatsu
Knowledge-based computational search for genes associated with the metabolic syndrome
Bioinformatics, July 15, 2005; 21(14): 3146 - 3154.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
D. R. Ekman, W. W. Lorenz, A. E. Przybyla, N. L. Wolfe, and J. F.D. Dean
SAGE Analysis of Transcriptome Responses in Arabidopsis Roots Exposed to 2,4,6-Trinitrotoluene
Plant Physiology, November 1, 2003; 133(3): 1397 - 1406.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
M. P. DeYoung, M. Tress, and R. Narayanan
Identification of Down's syndrome critical locus gene SIM2-s as a drug therapy target for solid tumors
PNAS, April 15, 2003; 100(8): 4760 - 4765.
[Abstract] [Full Text] [PDF]

Home page
 ScienceHome page
R. L. Strausberg and S. L. Schreiber
From Knowing to Controlling: A Path from Genomics to Drugs Using Small Molecule Probes
Science, April 11, 2003; 300(5617): 294 - 295.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
K. Boon, E. C. Osorio, S. F. Greenhut, C. F. Schaefer, J. Shoemaker, K. Polyak, P. J. Morin, K. H. Buetow, R. L. Strausberg, S. J. de Souza, et al.
An anatomy of normal and malignant gene expression
PNAS, August 20, 2002; 99(17): 11287 - 11292.
[Abstract] [Full Text] [PDF]


Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.