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Human Molecular Genetics Advance Access originally published online on March 5, 2008
Human Molecular Genetics 2008 17(12):1825-1837; doi:10.1093/hmg/ddn076
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© The Author 2008. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

Subnuclear localization and mobility are key indicators of PAX3 dysfunction in Waardenburg syndrome

Gareth N. Corry1, Michael J. Hendzel2 and D. Alan Underhill1,2,*

1 Department of Medical Genetics, University of Alberta, Edmonton, Alberta, Canada T6G 2H7 2 Department of Oncology, Cross Cancer Institute, Edmonton, Alberta, Canada T6G 1Z2

* To whom correspondence should be addressed at: Department of Medical Genetics, 829 Medical Sciences Building, University of Alberta, Edmonton, Alberta, Canada T6G 2H7. Tel: 780 492 4359; Fax: 780 492 1998; Email: alan.underhill{at}ualberta.ca

Received February 5, 2008; Accepted March 4, 2008

Mutations in the transcription factor PAX3 cause Waardenburg syndrome (WS) in humans and the mouse Splotch mutant, which display similar neural crest-derived defects. Previous characterization of disease-causing mutations revealed pleiotropic effects on PAX3 DNA binding and transcriptional activity. In this study, we evaluated the impact of disease alleles on PAX3 localization and mobility. Immunofluorescence analyses indicated that the majority of PAX3 occupies the interchromatin space, with only sporadic colocalization with sites of transcription. Interestingly, PAX3 disease alleles fell into two distinct categories when localization and dynamics in fluorescence recovery after photobleaching (FRAP) were assessed. The first group (class I), comprising N47H, G81A and V265F exhibit a diffuse distribution and markedly increased mobility when compared with wild-type PAX3. In contrast, the G42R, F45L, S84F, Y90H and R271G mutants (class II) display evidence of subnuclear compartmentalization and mobility intermediate between wild-type PAX3 and class I proteins. However, unlike class I mutants, which retain DNA binding, class II proteins are deficient for this activity, indicating that DNA binding is not a primary determinant of PAX3 distribution and movement. Importantly, class I properties prevail when combined with a class II mutation, which taken with the proximity of the two mutant classes within the PAX3 protein, suggests class I mutants act by perturbing PAX3 conformation. Together, these results establish that altered localization and dynamics play a key role in PAX3 dysfunction and that loss of the underlying determinants represents the principal defect for a subset of Waardenburg mutations.


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