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Human Molecular Genetics, 2002, Vol. 11, No. 2 147-152
© 2002 Oxford University Press

Different substitutions at residue D218 of the X-linked transcription factor GATA1 lead to altered clinical severity of macrothrombocytopenia and anemia and are associated with variable skewed X inactivation

Kathleen Freson1, Gert Matthijs2, Chantal Thys1, Paul Mariën3,4, Marc F. Hoylaerts1, Jos Vermylen1 and Chris Van Geet1,3,+

1Center for Molecular and Vascular Biology, 2Center for Human Genetics and 3Department of Pediatrics, University of Leuven, Leuven, Belgium and 4St Augustinus Hospital, Wilrijk, Belgium

Received September 18, 2001; Revised and Accepted November 15, 2001.


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
GATA1 is the X-linked transcriptional activator required for megakaryocyte and erythrocyte differentiation. Missense mutations in the N-terminal zinc finger (Nf) of GATA1 result in abnormal hematopoiesis, as documented in four families: the mutation V205M leads to both severe macrothrombocytopenia and dyserythropoietic anemia, D218G to macrothrombocytopenia and mild dyserythropoiesis without anemia, G208S to macrothrombocytopenia and R216Q to macrothrombocytopenia with ß-thalassemia. The three first GATA1 mutants display a disturbed binding to their essential transcription cofactor FOG1, whereas the fourth mutant shows an abnormal direct DNA binding. In this study, we describe a new family with deep macrothrombocytopenia, marked anemia and early mortality, if untreated, due to a different GATA1 mutation (D218Y) in the same residue 218 also implicated in the above mentioned milder phenotype. Zinc finger interaction studies revealed a stronger loss of affinity of D218Y–GATA1 than of D218G–GATA1 for FOG1 and a disturbed GATA1 self-association. Comparison of the phenotypic characteristics of patients from both families revealed that platelet and erythrocyte morphology as well as expression levels of the platelet GATA1-target gene products were more profoundly disturbed for the hemizygote D218Y mutation. The D218Y allele (as opposed to the D218G allele) was not expressed in the platelets of a female carrier while her leukocytes showed a skewed X-inactivation pattern. We conclude that the nature of the amino acid substitution at position 218 of the Nf of GATA1 is of crucial importance in determining the severity of the phenotype in X-linked macrothrombocytopenia patients and possibly also in inducing skewed X inactivation.


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
GATA transcription factors contain highly conserved C4-type zinc fingers which mediate sequence-specific binding to a consensus motif (A/T)GATA(A/G) (1,2). GATA1, the founding member of the GATA transcription factor family, is expressed at high levels in erythroid, megakaryocytic, mast and eosinophilic cells (3,4). Virtually all characterized erythroid-specific genes (i.e. {alpha}- and ß-globin) and megakaryocytic-specific genes (i.e. GPIIb, GPIb{alpha}, GPIbß, GPIX, PF4 and mpl) contain GATA motifs in critical cis-regulatory elements (4,5). The essential role of GATA1 in erythroid and megakaryocyte differentiation has been illustrated in two mouse models. Homozygous disruption of GATA1 causes embryonic lethality due to a severe erythroid defect (6,7). In contrast, mice with a mutation in the upstream region of GATA1 (GATA1 knockdown mice) show a milder erythroid defect but suffer from severe thrombocytopenia due to absent GATA1 expression in the megakaryocytic lineage (4).

GATA1 contains two zinc fingers; the C-finger, sufficient for sequence-specific direct DNA binding, and the N-finger (Nf), which plays a role in the stabilization of GATA1 binding to DNA (8). The Nf can regulate transcription by binding to a GATA1-interacting nuclear zinc-finger protein FOG1, friend-of-GATA1. FOG1 is coexpressed with GATA1 during embryonic and hematopoietic development (9). FOG1 knockout mice die during mid-embryonic development with severe anemia and show a specific ablation of the megakaryocytic lineage (10). Recently, it was shown that the Nf can bind GATC sites in isolation and stabilizes binding to double GATA sites (11). The Nf also seems implicated in GATA1 self-association by interacting with the C-finger. Although there is a clear involvement in transcription regulation, the exact biological role of this self-association in gene activation is not certain (12,13).

Recently, different missense mutations in the Nf of GATA1 were found in four families, leading to a variable degree of macrothrombocytopenia with or without abnormalities in the erythrocyte lineage. Two related patients with X-linked dyserythropoietic anemia and macrothrombocytopenia carry a V205M mutation, which leads to a reduced interaction of the Nf of GATA1 with FOG1 (14). We originally described a family with mutation D218G in the same Nf of GATA1, showing isolated X-linked macrothrombocytopenia and some features of dyserythropoiesis but without marked anemia (15). Another family with macrothrombocytopenia was described carrying mutation G208S, and finally a family with both macrothrombocytopenia and ß-thalassemia carried mutation R216Q (16,17). The V205M, D218G and G208S mutations reduce the interaction of GATA1 with FOG1, although to a different degree, whereas the R216Q mutation results in a reduced interaction with a GATA DNA recognition site (11,1417).

In the present study, we describe a new family with a different missense mutation at position D218. We compare the clinical severity in both our families and show that the phenotype not only depends on the position of the GATA1 mutation but also on the nature of the substituted amino acid. The GATA1 self-association was checked for both D218–GATA1 mutants. We determined the degree of skewed X inactivation in female carriers, because some X-linked genetic disorders in constitutional or in some specific lineages are known to give rise to skewing of X inactivation (18). Finally, we also studied the expression of the mutant GATA1 in the platelets of obligate carriers from both families.


    RESULTS
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
Family description and mutation analysis
We describe a new family characterized by pronounced X-linked dyserythropoietic anemia and deep macrothrombocytopenia, in which six affected boys died before the age of 2 years (Fig. 1A). The only affected member still alive (patient III:1) is a 1-year-old boy with deep transfusion-dependent anemia and macrothrombocytopenia. The hematological data of this patient and his mother (obligate carrier) are listed in Table 1. The peripheral blood smear of patient III:1 shows a small number of normal to giant platelets, dysmorphic erythrocytes (anisocytosis and poikilocytosis) and the presence of some normoblasts. Electron microscopy of his platelets displays the typical paucity of {alpha} granules and the presence of clusters composed of smooth endoplasmic reticulum (15). Bone marrow examination by light and electron microscopy reveals strong dyserythropoiesis with dysmorphic erythroblasts (multinucleated and with clumping of the heterochromatin) and dysplastic megakaryoblasts. The mother (II:1) is not anemic, has no dysmorphic erythrocytes and has a normal platelet number with normal ultrastructure on electron microscopy. A very small number of enlarged platelets is however present.



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Figure 1. Family presentation and molecular analysis. (A) A pedigree of the family of patient III:1. Patients with the X-linked thrombocytopenia and anemia are represented by closed symbols, female carriers by half-closed circles, deceased members by a slash. (B) Sequencing electropherogram of a control, the patient III:1 and his mother II:1 (carrier), respectively, hemizygous and heterozygous for the base pair substitution G->T at nucleotide position 652 of the Nf of GATA1 in leukocyte genomic DNA.

 

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Table 1. Hematological profiles of patient III:1 and obligate carrier II:1 with the D218Y–GATA1 mutation and obligate carrier IV:4 with the D218G–GATA1 mutation
 
The pedigree structure and the typical hematopoietic abnormalities were suggestive for a mutation in the X-linked gene GATA1 (14,15). Therefore, we sequenced the GATA1 cDNA and found a missense mutation (G->T) at nucleotide position 652 in patient III:1. The mutation was confirmed in genomic DNA from leukocytes. The mother is an obligate carrier and heterozygous for this mutation (Fig. 1B). The clinically non-affected males (III:6, III:7 and III:8) did not have this mutation. The mutation (652 G->T) is located immediately adjacent to our previously reported missense mutation (653 A->G) and results in a different amino acid substitution at the same position 218 (D218Y versus D218G) of the Nf of GATA1.

In vitro effects of the GATA1 mutation
Although their mutations are located in the same residue of GATA1, the differences in clinical severity between the patients in our previously reported family carrying the D218G mutation and the patients of the present family carrying the D218Y mutation are striking. Nf GATA1 interaction studies and expression studies of the GATA1-target gene products in platelets were therefore undertaken.

In vitro binding studies with either the FOG1 fingers 5–9 or FOG1 finger 1 were performed with the different GATA1 Nfs (Fig. 2A). D218Y–GATA1 had a weaker affinity for FOG1 than D218G–GATA1; its affinity was similar to that of the V205M mutant. Furthermore, the interaction of the different GATA1 Nfs with the complete wild-type GATA1 protein was studied. The binding of the D218 GATA1 mutants was decreased compared to that of the wild-type or of the V205M GATA1 Nf. We infer that the interaction with FOG1 not only depends on the position of the mutation as had been suggested by Fox et al. (19) and Crispino et al. (20), but also on the nature of the amino acid substituted. We also conclude that both D218 GATA1 mutations hamper self-association of the GATA1 protein.




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Figure 2. In vitro and in vivo characteristics of the two D218 GATA1 mutants. (A) GST pull-down assay to study the GATA1 Nf:FOG1 interaction and the GATA1 Nf:complete GATA1 self-association. In vitro transcription/translated FOG1 fingers (fingers 5–9 and finger 1) or complete GATA1 were incubated with the different GST fusion proteins or with GST immobilized on glutathion agarose beads. The autoradiogram shows the amount of retained 35S-labeled FOG1 or 35S-labeled GATA1. Densitometry plots are incorporated to quantify the amounts of retained FOG or GATA1. The lowest panel shows the Coomassie blue staining of the gel confirming equal GST fusion protein sample loading. (B) DNA-binding competition assay (representative for three experiments). The amount of biotinylated DNA (100 µM) bound by GST/GATA1 fusion proteins was plotted against the concentration of non-labeled competitor DNA. Control GST-bound beads gave no DNA binding. (C) Platelet glycoprotein and Gs{alpha} expression analysis in platelets of a patient with the D218G–GATA1 mutation, patient III:1 with the D218Y–GATA1 mutation and carrier II:1 versus control platelets. Each lane contains a similar amount of total platelet proteins.

 
Direct binding of the GATA1 mutants to DNA, studied as previously described by Freson et al. (15), was not disturbed (Fig. 2B).

In vivo effect of the GATA1 mutation
To approach the in vivo effects of the two D218 mutants, we studied the GATA1-dependent gene regulation in the patients’ platelets of both families. Because we could not obtain enough mRNA from the platelets of patient III:1, only expression at the protein level was studied. Expression levels of GATA1-target gene products (GPIb{alpha} and GPIbß) and of a non-directly GATA1-regulated gene product (Gs{alpha}) were analyzed. Western blot analysis showed undetectable levels of GPIb{alpha} and GPIbß in the platelets of patient III:1 (with mutation D218Y), in contrast to the reduced but detectable levels of GPIb{alpha} in the patient with the D218G mutation (Fig. 2B) (15). The Gs{alpha} protein was studied as a marker for incomplete platelet maturation since it is upregulated during megakaryocyte differentiation and has no known GATA1 regulatory element in its promoter (21). Compared to the slightly weaker expression in the patient with mutation D218G, the Gs{alpha} expression is only 50% in the platelets of patient III:1, suggestive of incomplete platelet maturation. Similar to what was observed in the carriers of the D218G–GATA1 mutation, no abnormalities were found in the platelets of the D218Y carrier.

Study of the X-inactivation pattern and analysis of abnormal GATA1 message in platelets of female carriers
The X-inactivation pattern in an obligate carrier from both families was analyzed. Carrier IV:4 with the D218G–GATA1 mutation (15) is informative for the androgen receptor (AR) polymorphism and showed slightly skewed X-chromosome inactivation (Fig. 3A). PCR fragments derived from one of the two alleles did not selectively disappear in either HhaI or CfoI digested samples. In contrast, carrier II:1 with the D218Y–GATA1 mutation was informative for the monoamine oxidase A (MAOA) polymorphism and showed clear skewed X inactivation (Fig. 3A). After digestion with either HpaII or SmaI, fragments amplified from one of the two alleles almost completely disappear.



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Figure 3. X-chromosome analysis and GATA1 mutation detection in carriers. (A) Analysis of the pattern of X-chromosome inactivation in carrier IV:4 (mutation D218G) and carrier II:1 (mutation D218Y). Genomic DNA was extracted from leukocytes and amplified by PCR with FITC-labeled primers flanking the AR gene locus (for carrier IV:4) or the MAOA gene locus (for carrier II:1). These individuals were only informative for these respective polymorphisms. Before PCR analysis, DNA was digested with different methylation-sensitive enzymes HpaII (green) or CfoI (blue) in the case of carrier IV:4 and with HpaII (green) or SmaI (blue) in the case of carrier II:1. For the MAOA polymorphism, digestion with a non-methylation-specific enzyme MspI (black) is used as a digestion control reaction. Digested and non-digested (red) PCR fragments were sized and quantified on the A.L.F. DNA sequencer. Both alleles are represented by a peak and their activation or methylation pattern is indicated [methylated or inactive (*) versus unmethylated or active (**)]. (B) Sequence analysis revealed both A and G at position 653 (D218G) in the GATA1 cDNA from the platelets of carrier IV:4. For carrier II:1, only one signal was detected at the site of the mutation (position 652) in the platelet GATA1 cDNA. This is in contrast to the sequence of the leukocyte genomic DNA, where two signals were found (G and T in Fig. 1B).

 
The expression of the two D218–GATA1 mutations was also studied in the platelets from both carriers using RT–PCR and sequencing. Carrier IV:4 from the D218G–GATA1 family was heterozygous for the mutation at the mRNA level in her platelets (Fig. 3B). In the case of carrier II:1 of the D218Y–GATA1 family, the abnormal GATA1 allele was not detected at the mRNA level (Fig. 3B).


    DISCUSSION
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
We showed that the severity of the phenotype of X-linked macrothrombocytopenia and dyserythropoiesis with or without anemia varies with the kind of missense mutation at a particular position and correlates with the degree of disturbed interaction of the mutant GATA1 with FOG1.

In contrast to position 218, residue 205 was considered at least in vitro to be important for GATA1:FOG1 zinc fingers interaction. It is now obvious that residue 218 also is crucial for this interaction in vitro and in vivo; moreover, the degree of disturbance upon mutation depends on the amino acid residue it is mutated to.

Biochemical studies have demonstrated that the zinc finger domains of GATA1 are also involved in the GATA1 self-association (12). Recently, it became clear that self-association is mediated by the Nf of GATA1 making intermolecular contact with the C-finger (13). A deletion mutant of the GATA1 Nf affects this association and interferes with its ability to activate transcription in transfection studies, especially from multi-GATA1 site promoters. Mackay et al. (13) also speculated on the exact biological role of the self-association; it would increase the local concentration of GATA1 and therefore extend its potency as a transcriptional activator. Since many erythroid promoters contain multiple GATA sites, it could be involved in the ordered assembly of higher order complexes at such promoters. The possible contribution of a disturbed GATA1 self-association by the D218 mutation to the clinical phenotype is not clear. However, our work shows for the first time that a missense mutation in the Nf can lead to a disturbed GATA1 self-association.

We were also interested in the consequences of the GATA1 mutation for the carriers from both families. GATA1 is an X-linked gene and a molecular defect can be involved in preferential cell selection and this results in skewed X inactivation in peripheral blood leukocytes. Such observations were found in other X-linked disorders as in X-linked agammaglobulinemia, incontinentia pigmenti type 2, Wiskott–Aldrich syndrome and dyskeratosis congenita (2225). The carriers of both the D218G and the D218Y mutation had a normal platelet count but sporadically had a large-sized platelet in the peripheral blood smear. We analyzed isolated platelets from both carriers for the presence of mutant GATA1 mRNA. Carrier IV:4 (D218G) is heterozygous in her mRNA for the GATA1 mutation whereas in platelets from carrier II:1 with the more severe D218Y mutation, no mutant GATA1 mRNA could be detected although she is heterozygous at the genomic level. Although carrier IV:4 has platelets with abnormal GATA1 message, only a few large-sized platelets were detected and the mean platelet volume was within the range of controls, however, at the upper limit. Why are there not two distinct platelet populations in this carrier? A possible explanation is that patients with a GATA1 mutation also have some normal-sized platelets, so at least part of the megakaryocytes with mutant GATA1 seem to still undergo a normal maturation. Carrier II:1 of the severe D218Y mutation has a normal peripheral blood count, agreeing with no mutant GATA1 expression in her platelets. The absence of mutant GATA1 message could be due to the loss of large platelets during the centrifugation step for platelet isolation or to the lack of sensitivity of our RT–PCR analysis, which may not detect a subset of abnormal platelets expressing mutant GATA1. More likely, the absent or at least strongly reduced expression of the mutant GATA1 allele in the platelets of carrier II:1 is related to the observed nearly complete skewing of the X inactivation in leukocytes. This suggests that the severe D218Y mutation impedes embryonic cell growth, whereas clones derived from a single stem cell or stem cell precursors with a normal GATA1 have a proliferative advantage. However, stochastic inactivation could also account for the observed skewing in this carrier (18). Skewing can be complete in random individuals (18). Nevertheless, in these two carriers, the X-inactivation patterns correlate with the clinical observations. Unfortunately, we did not have access to more samples.

In conclusion, our data provide further evidence that there indeed is a link between the severity of clinical features associated with GATA1 mutations and the extent of reduction in FOG1:GATA1 association. The clinical and biochemical differences between the two D218 GATA1 mutants are reflected in the variable loss of expression of GATA1-dependent genes in the patients’ platelets. Even in the asymptomatic carriers, a functional difference between the two D218–GATA1 mutants remains since it results in, respectively, a completely skewed X inactivation in leukocytes for D218Y and in a random X inactivation for D218G.


    MATERIALS AND METHODS
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
RNA isolation and cDNA synthesis
Total RNA was extracted from platelets using TRIzol reagent (Gibco BRL) according to the manufacturer’s protocol. Approximately 1 µg RNA was used for oligo(dT)-primed first-strand cDNA synthesis using M-MLV reverse transcriptase (Gibco BRL).

Genetic analysis of GATA1
The following primer set was used to generate a full-size GATA1 cDNA fragment: GATA1-F1 (CCCAGAATTCTCCCCAGAGGCTCCATGGAG) and GATA1-R1 (GGCCCTCGAGTGTGCCCTCATGAGCTGAGC). PCR was performed by adding 4 µl cDNA aliquots to the reaction mixture containing 25 pmol of each primer, 10 mM Tris–HCl buffer, pH 8.7, 1 mM MgCl2, 50 mM KCl, 0.01% gelatine, 1% DMSO, 200 mM dNTP, 1 U Ampli-Taq polymerase (Perkin Elmer Cetus). PCR was performed in a PTC-100TM programmable thermal controller (MJ Research Inc., Biozym) using the following conditions: 95°C for 5 min followed by 30 cycles of 95°C for 30 s, 60°C for 1 min and 72°C for 1.5 min, and final extension at 72°C for 10 min. Primers GATA1-F1, GATA1-F2 (GGTGTACCCATTGCTCAACTGTATG), GATA1-R1 and GATA1-R2 (GTTTACTGACAATCAGGCGCTTC) were used for sequencing PCR generated cDNA fragments from patients using BigDye terminator chemistry (Perkin-Elmer Cetus) on an ABI310 (Perkin-Elmer) sequencer. The resulting sequences were aligned and compared with the published sequence in GenBank (accession no. XM 010214). PCR and sequencing of genomic DNA from leukocytes were performed with primers GATA1-F2 and GATA1-R2 using the same conditions as described above.

GST pull-down assay with GATA1 peptides
GATA1 Nf, GATA1 Nf D218G, GATA1 Nf D218Y and GATA1 Nf V205M (residues 197–251)–GST fusion proteins, coupled to glutathione–agarose beads, were prepared as described earlier by Freson et al. (15). Experiments with either in vitro translated S35-labeled FOG1 fragments [consisting of finger 1 (241–291) or fingers 5–9 (587–997)] or S35-labeled complete GATA1 were carried out as described previously (1517). Primer sequences are available on request.

GST fusion protein/DNA-binding assay
DNA-binding studies were performed using a single GATA recognition site (the mouse {alpha}-globin GATA site (GATCTCCGGCAACTGATAAGGATTCCCTG) with a biotinylated 5' end) and the assay as described by Freson et al. (15).

Platelet immunoblot analysis
Proteins were extracted from platelets of patients, a carrier, and a normal individual using a modified lysis buffer [1% igepal CA-630 (Sigma Chemical Co.), 2 mmol/l Na3VO4, 1 mmol/l EDTA, 1 mmol/l phenylmethylsulfonyl fluoride, 2 mmol/l DTE, 1% aprotinin and 2 mmol/l NaF] by four cycles of freezing (–80°C) and thawing (37°C). Lysates were cleared of insoluble debris by centrifugation at 14 000 g for 20 min at 4°C. Protein expression was assessed by western blot analysis. Platelet protein fractions were mixed with Laemmli sample buffer (5% SDS reducing buffer), resolved by SDS–PAGE on 7% (for GPIb{alpha}), 12.5% (for GPIbß) or 10% (for Gs{alpha}) acrylamide gels, and transferred to Hybond ECL-nitro-cellulose membrane (Amersham Pharmacia Biotech). The blots were blocked for 1 h at room temperature in Tris-buffered saline with tween (TBS-T; 0.1% Tween-20) supplemented with 5 % non-fat dry milk. Incubation with primary (overnight at 4°C) and secondary antibody (2–3 h at room temperature) was performed in TBS-T with 5% non-fat milk. The primary antibodies were produced in our laboratory and used at 50 µg/ml. Blots were revealed with a monoclonal anti-Gs{alpha} antibody ({alpha}3), a monoclonal anti-GPIb{alpha} antibody (G27C9) or a polyclonal anti-GPIbß antibody. The secondary antibody was conjugated with HRP and staining was performed with the western blotting ECL detection reagent (Amersham Pharmacia Biotech).

X-chromosome inactivation analysis
The AR X-inactivation assay has been described elsewhere (26,27). In brief, treatment of genomic leukocyte DNA with the methylation-sensitive enzymes HpaII and CfoI results in digestion of alleles residing on the active X chromosome. Subsequent PCR with primers flanking the restriction sites and a polymorphic CAG repeat results in amplification of alleles on the inactive X only. In females heterozygous for the AR polymorphism, the two amplification products can be compared directly. We have used this technique and analyzed the PCR products on an A.L.F. DNA sequencer (Amersham Pharmacia Biotech) to determine the X inactivation pattern quantitatively.

Similarly, a VNTR polymorphism at the 5' end of the MAOA gene coupled to a differentially methylated CpG island was used (28). For that purpose we used methylation-sensitive enzymes HpaII and SmaI. Digestion with a non-methylation-sensitive enzyme (MspI) served as a control.


    ACKNOWLEDGEMENTS
 
We are indebted to E.Schollen for assistance with the X-inactivation studies. C.V.G. is holder of a fundamental clinical research mandate of the FWO Vlaanderen. Financial support by the FWO Vlaanderen (project G.0306.98) is greatly appreciated.


    FOOTNOTES
 
+ To whom correspondence should be addressed at: Center for Molecular and Vascular Biology, UZ-Gasthuisberg, Herestraat 49, 3000 Leuven, Belgium. Tel: +32 16 345775; Fax: +32 16 345990; Email: christel.vangeet@uz.kuleuven.ac.be Back


    REFERENCES
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
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