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Human Molecular Genetics, 2002, Vol. 11, No. 6 675-687
© 2002 Oxford University Press

The expression of a new variant of the pro-apoptotic molecule Bax, Bax{psi}, is correlated with an increased survival of glioblastoma multiforme patients

Pierre-François Cartron1, Lisa Oliver1, Stéphane Martin1,2, Carole Moreau1, Marie-Thérèse LeCabellec1, Pascal Jezequel3, Khaled Meflah1 and François M. Vallette1,+

1IFR 26, INSERM UMR 419, 9 quai Moncousu, 44035 Nantes Cedex 01, France, 2Clinique Universitaire de Neurochirurgie, Hôpital G and R Laennec, CHU Nantes, Bld J. Monod-St Herblain, 44093 Nantes Cedex 01, France and 3Centre René Gauducheau, Bld J. Monod-St Herblain, 44093 Nantes Cedex 01, France

Received November 20, 2001; Revised and Accepted January 24, 2002.

DDBJ/EMBL/GenBank accession no. AJ417988.


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
Pro- and anti-apoptotic members of the BCL-2 family play a central role in the implementation of apoptosis. Bax, a pro-apoptotic member of this family, has as such been considered as a potential tumor suppressor. Here, we have examined the expression of Bax in 55 patients with glioblastoma multiforme (GBM), the most common and aggressive form of brain tumors. We report on the existence of a new form of Bax, present in 24% of the patients, which we called Bax{psi}. Bax{psi} is a N-terminal truncated form of Bax which results from a partial deletion of the exon 1 of Bax gene. Bax{psi} and the wild-type form, Bax{alpha}, are encoded by distinct mRNAs, both of which are present in normal tissues. Glial tumors express either Bax{alpha} or Bax{psi} proteins, an apparent consequence of an exclusive transcription of the corresponding mRNAs. The latter feature could be partially linked to distinct methylation profiles of Bax gene in these tumors. The Bax{psi} protein is preferentially localized to mitochondria and is a more powerful inducer of apoptosis than Bax{alpha}. Bax{psi} tumors exhibit a slow proliferation in Swiss nude mice and this feature can be circumvented by the co-expression of the Bcl-2 transgene, the functional antagonist of Bax. More importantly, the expression of Bax{psi} correlates with a longer survival in patients (18 months versus 10 months for Bax{alpha} patients). Thus, our results provide the first indication of a beneficial involvement of a variant of the pro-apoptotic protein Bax in tumor progression.


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
Apoptosis is a cell death program which appears to be associated with various aspects of normal and pathological cell physiology (1,2). In vitro studies suggest that the loss of a fully functional apoptotic program could influence several stages of tumorigenesis (2,3). The complexity of this process, which involves numerous molecular partners in multiple metabolic or signaling pathways, as well as the lack of reliable techniques to visualize cell death can, at least partially, explain the absence of definitive evidence of the implication of apoptosis in tumorigenesis in vivo (24). Members of the BCL-2 family are potent regulators of the execution phase of apoptosis (5). Bax, a pro-apoptotic member of this family, plays a central role by mediating the release of apoptogenic proteins, such as cytochrome c, from mitochondria (6). Due to its pro-apoptotic action, Bax has been considered a potential tumor suppressor and indeed, this has been directly shown in animal models of brain and mammary tumorigenesis (7,8). Consistent with this putative role, Bax mutations associated with microsatellite instability, which inactivate its function, enhance tumorigenesis in human hereditary non-polyposis colorectal cancers (9) and increase the resistance to apoptosis in cell lines derived from hematopoietic malignancies (10,11). The expression of Bax has been reported to be under the transcriptional control of p53 in human tumors (12) and also under that of c-myc (13). Thus, in addition to direct inactivation, alterations in the function of these proto-oncogenes, which are often observed in cancers, could also affect the function of Bax. These results suggest that the dysregulation of the function of Bax in malignant tumors could have a selective advantage for the progression of cancers. The Bax gene encodes several variants of Bax but their functions as well as their regulation are not known nor appear to be different from the principal form, Bax{alpha} (14). In this work, we report on the existence of a naturally occurring variant of Bax, the expression of which is restricted to tumors of glial origin. We found that this variant is a more potent inducer of apoptosis than Bax{alpha} and that its expression could be correlated with an increased survival of patients with glioblastoma multiforme (GBM), the leading cause of death in primary human brain cancer (15,16).


    RESULTS
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
Immunoblot analysis of Bax in a series of GBM
We have analyzed by immunoblot the expression of Bax in 55 human GBMs (WHO grade IV astrocytoma) (15) resected tumors using several antibodies raised against distinct parts of the human Bax{alpha} sequence (Fig. 1A). We have illustrated the results of immunoblots performed on 55 patients with an antibody raised against the amino acid sequence (amino acids 43–61; Fig. 1B). In most tumors (42/55), a single band with an apparent molecular weight of 21 kDa (p21Bax) was detected by this antibody, whereas in two out of the 55 tumors no immunoreactivity toward Bax was found (Fig. 1B). At variance, in 13/55 tumors, a unique immunoreactive band with an apparent molecular weight of 19 kDa (p19) was observed (Fig. 1B). As truncation of the N-terminus of Bax during the terminal phase of apoptosis has been reported (17), we performed immunoblots with the antibody raised against the N-terminal sequence of human Bax{alpha} (amino acids 3–16) (Fig. 1A). As shown in Figure 1C, this antibody failed to recognize the p19. However, this protein was recognized by an antibody raised against a C-terminal peptide (150–165) of human p21Bax (Fig. 1B), confirming that p19 belonged to the Bax{alpha}/p21Bax family. On the other hand, no immunoreactivity with the latter antibodies was observed in the two tumors which thus failed to respond to all anti Bax antibodies tested (data not shown).



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Figure 1. Evidence of the existence of a p19Bax/Bax{psi} isoform of Bax. (A) p21Bax/Bax{alpha} sequence. Summary map illustrating Bax{alpha} protein structure with representation of Bcl-2 homology domains (BH) and epitope localizations of the antibodies used in this study. (B) The existence of a p19 form of Bax in human GBM (illustration of seven out of 55 GBM patients analyzed). Glioblastoma tumor extracts (50 µg) were analyzed in 15% SDS–PAGE followed by immunoblots using antibodies raised against epitopes located between amino acid residues 43 and 61 of Bax{alpha} sequence. (C) Similar studies with three different antibodies raised against different epitopes anti Bax N- or C-terminus (A). Two representative tumors, with or without the p19 form of Bax, are shown. Actin was used as internal standard.

 
Distinct mRNAs encode for Bax{alpha} and Bax{psi}
We next analyzed the mRNA structure of p21Bax and p19Bax by RT–PCR using primers listed in Table 1 and schematically located on Bax{alpha} mRNA in Figure 2A. The Bax N primer in combination with Bax C was used to amplify Bax mRNAs in tumors harboring either p21Bax or p19Bax. As shown in Figure 2B, no amplification was obtained with mRNAs extracted from p19Bax tumors whereas a 580 bp amplified band, the size expected from the Bax{alpha} sequence (14), was observed in p21Bax tumors. As a control, we used primers which amplified a region encompassing exons 3 and 4. In the latter case, amplification products with similar and expected sizes were observed in both p21Bax and p19Bax tumors (Fig. 2B). This result suggested that the first nucleotides of Bax{alpha} mRNA were absent or modified in mRNA(s) encoding p19Bax. The 5' end of Bax mRNAs was analyzed by SMART RT–PCR in p21Bax and p19Bax GBM (see Materials and Methods). In Bax{alpha} tumors, a single band of 621 bp was obtained (Fig. 2B) and its sequence was in complete accordance with the published sequence of p21Bax/Bax{alpha} (14) (Fig. 2C). In contrast, in p19Bax tumors, SMART RT–PCR produced a single band of 556 bp (Fig. 2B). Amplification between exon 3 and the SMART 5' sequence confirmed that the deletion was located within the first 3 exons (Fig. 2B). Sequencing of the SMART RT–PCR amplified Bax products, indicated that the p19Bax was encoded by a mRNA exhibiting a deletion within exon 1 (Fig. 2C). We concluded that the p19Bax protein corresponded to a variant of Bax{alpha}/p21Bax lacking part of the exon 1 sequence which we have called Bax{psi} (EMBL Nucleotide Sequence database accession no. AJ417988). A second ATG located at position 20 in Bax{alpha} can be used as an alternative initiator methionine (1820). Cell-free transcription/translation confirmed that the Bax{psi} sequence began at this methionine and thus lacked the first 20 amino acids of Bax{alpha} (data not shown).


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Table 1. Sequence of primers used in RT–PCR experiments, in Southern and northern blots and in genomic PCR
 


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Figure 2. RT–PCR analysis of mRNAs encoding for p21Bax/Bax{alpha} and p19Bax/Bax{psi}. (A) schematic representation of Bax{alpha} mRNA: the first ATG as well as the localization of oligonucleotides used in this study are summarized in the representation of Bax{alpha} mRNA. Exon boundaries are indicated by arrows. (B) RT–PCR analysis revealed the existence of a new form of Bax, Bax{psi}, coding for p19Bax: two representative tumors are shown and RT–PCR experiments were performed as described in Materials and Methods. Amplification using exon 1 (Bax N) and exon 6 probe (Bax C) gave a 580 bp band in p21Bax tumors and no band in p19Bax tumors. SMART RT–PCR using either Bax C or BAXAS30 primers were performed to determine the 5' end of Bax mRNAs in Bax{alpha} and Bax{psi} tumors. ß2-macroglobulin was used as an internal standard for the RT–PCR experiments in these tumors (data not shown). (C) The 621 bp and the 556 bp obtained previously by SMART RT–PCR were subcloned in pGEM and sequenced, revealing a deletion of 64 nucleotides in p19Bax/Bax{psi} tumors (bottom sequence) compared to p21Bax/Bax{alpha} sequence (top sequence).

 
Mature mRNAs obtained from Bax{alpha} or Bax{psi} tumors, as well as from peritumoral (PT) and control brain tissue, were analyzed by northern blot either using exon 1 or exon 3–4 sequences as probes (Fig. 2A). In non-tumoral (NT) or PT brain tissues, the exon 3–4 probe hybridized with two major bands with a molecular weight of 1.1 and 1.6 kb, respectively; whereas the exon 1 probe hybridized with only the 1.6 kb band (Fig. 3A). In Bax{alpha} tumors, the exon 1 probe labeled only the 1.6 kb RNA and did not recognize any mRNA in Bax{psi} tumors (Fig. 3A). The exon 3–4 probe hybridized with only one of the Bax encoding mRNA in each type of GBM tumor (i.e. the 1.6 kb mRNA in Bax{psi} tumors and the 1.1 kb mRNA in Bax{alpha} tumors) (Fig. 3A). It should be noted that the PT tissues illustrated in Figure 3 were derived from either Bax{alpha} or Bax{psi} patients. To further analyze Bax{psi} expression, we investigated its presence in a selection of normal tissues of different origins (colon, lung, spleen, thymus, leukocytes). We found that the labeling of Bax mRNAs with exon 1 or exon 3–4 probes was similar to that found in normal brain tissue although mRNAs exhibited a molecular weight inferior to that observed in brain (1.5 and 1 kb). This result suggested that Bax{psi} mRNA was also present in normal tissue outside of the central nervous system (CNS) (Fig. 3B). However, in contrast to GBM, tumoral tissues derived from colon cancer, ovary carcinoma or acute myeloid leukemia (AML) expressed both Bax{alpha} and Bax{psi} transcripts, suggesting that restriction of Bax{alpha} or Bax{psi} mRNA expression was specific for CNS tumors (Fig. 3B). This was confirmed by RT–PCR analysis on tumors of different origins (Table 2). It should be noted that, under our conditions, Bax{alpha} appears to be encoded by the 1.5/1.6 kb mRNA in all tissues examined, contrary to what was originally reported by Oltvai et al. (14).



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Figure 3. Bax{alpha} and Bax{psi} tumors expressed different Bax mRNAs. (A) Schematic representation of probes in the northern blots. (B) Northern blot analyses of brain tissue obtained from NT pathologies or from PT tissues from Bax{alpha} or Bax{psi} tumors were hybridized with either exon 3–4 or exon 1 probes as described in Materials and Methods. Two mRNAs of 1.6 and 1.1 kb were labeled with the exon 3–4 probe whereas only the upper band was labeled with the exon 1 probe. Bottom, Bax{alpha} and Bax{psi} tumors were labeled with either the exon 3–4 or the exon 1 probe. In Bax{alpha} tumors, only the 1.6 kb mRNA was labeled while in Bax{psi} tumors only the 1.1 kb mRNAs were labeled. Three tumors representative of Bax{alpha} or Bax{psi} are illustrated. (C) Northern blot analysis of different control tissues was performed using the exon 1 or exon 3–4 probes. Bottom, tumoral tissues were obtained immediately after resection from patients with breast or ovarian carcinomas as well as bone marrows collected from acute myeloid leukemia patients. Northern blots of Bax mRNA from three representative patients (called A, B and C) are illustrated for each tumor.

 

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Table 2. Proportion of Bax{psi} (as determined by RT–PCR) in human tumors
 
The regulation of the expression of Bax{psi} is likely to be post-translational
Interestingly, we did not observe the presence of Bax{psi} by immunoblot in tissues derived from NT brain tissue or from non-glial tumors (data not shown). This result suggested that although Bax{psi} mRNAs were present in most tissues, the corresponding protein was not found except in a small subset of glial tumors. We thus address the nature of the regulation of the expression of Bax{psi} in these tissues. As shown in Figure 4A, the in vitro translation of mRNAs purified from Bax{alpha} and Bax{psi} tumors indicated that the corresponding form of Bax was synthesized in these tumors. On the other hand, both p21Bax/Bax{alpha} and p19Bax/Bax{psi} were synthesized in vitro by mRNAs obtained from control tissues (brain normal or PT tissues) or non-glial tumors (Fig. 4B). The latter results suggested that p21Bax underwent a rapid post-translational degradation in non-glial tumor tissue or that factors present in tissues prevented the translation of its mRNA.



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Figure 4. In vitro translation of mRNAs purified from Bax{alpha} and/or Bax{psi} expressing tissues. (A) mRNAs from Bax{alpha} or Bax{psi} tumors were purified and translated in a rabbit reticulocyte system and analyzed by 15% SDS–PAGE followed by immunoblot with anti C- or anti N-terminus Bax antibodies as described in Materials and Methods. Extr., tumoral extract; Trans., products of the in vitro translation. (B) RNAs were purified from NT nervous tissues (patients 21 and 90) or PT GBM tissues (patients 12 and 39) as well as colon carcinomas (patients A and B) and were in vitro translated. The products of translation were analyzed by 15% SDS–PAGE and immunoblot as described in the Materials and Methods section.

 
Analysis of the Bax gene in Bax{alpha} and Bax{psi} tumors
Southern blots using genomic DNA digested with EcoRI and HindIII and labeled with an exon 1 or exon 3–4 probe indicated that the overall genomic structure of the Bax gene was similar in Bax{alpha} and Bax{psi} tumors (Fig. 5A). These results were in agreement with cytogenetic studies which showed no genomic or chromosomal rearrangements within the Bax gene in human GBM using an exon 1 probe (21).



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Figure 5. Genomic analysis of Bax{alpha} and Bax{psi} tumors. (A) Southern blots were performed as described in Materials and Methods. Genomic DNA was purified from three different Bax{alpha} or Bax{psi} tumors and from PT tissue then digested with EcoRI and HindIII using standard protocols. Blots were hybridized with either exon 3–4 or exon 1 probe. (B) PCR mapping of Bax gene in Bax{alpha} and Bax{psi} GBM and in PT tissues derived from either Bax{alpha} or Bax{psi} patients as well as NT control tissues. Genomic DNA was extracted from tissues and PCR performed as described in Materials and Methods with probes listed in Table 1. Left, schematic representation of the 5' end of the Bax gene; right, PCR amplification of the fragments on a 0.8% agarose gel with the corresponding molecular weight. (C) The 5' deletion observed in Bax{psi} is tumor specific. Amplifications within the gene adjacent of Bax (2DD) was performed using the G oligonucleotides (Table 1) and between the 3' end of this gene and the 5' end of Bax with the oligonucleotides H (Table 1). Schematic representation of the two genes and localization of oligonucleotides G and H (left) and PCR amplification of the fragments analyzed on agarose gels (right). Only Bax{psi} tumors samples presented a deletion on the 5' end of the gene.

 
We have analyzed the organization of the Bax gene by PCR, using several probes which encompass the whole 5'-untranslated region of Bax gene (21). As shown in Figure 5B, the Bax gene was deleted in the Bax{psi} tumors between positions –972 (beginning of the gene) and –779. However, it should be noted that, as shown in Figure 5B, this deleted sequence did not contain any of the promoter sites proposed for Bax (12,13).

One possible explanation for the observed pattern of expression of Bax{alpha} and Bax{psi} expression in glioblastoma tumors is that these two variants represented two alleles of the Bax gene (i.e. one allele ‘{alpha}’ and one allele ‘{psi}’) which could be segregated in the tumors. We have examined this hypothesis by analyzing the (–972/–779) deletion observed in Bax{psi} tumors in normal tissue. As shown in Figure 5C, this deletion was not observed in normal tissue, thus suggesting that it was tumor specific rather than constitutional and ruling out the ‘alleles’ hypothesis.

Microscopic observations of both Bax{alpha} and Bax{psi} GBMs indicated the presence of normal cells infiltrating the tumors. This means that some Bax{alpha} should be detected in Bax{psi} tumors in PCR experiments. Indeed, the presence of a small proportion of Bax{alpha} cells in Bax{psi} tumors was confirmed by PCR using internal exon 1 probes (data not shown).

Methylation of genes can be responsible for alternative transcriptions in cancers (22,23) and several CpG sites representing putative methylation sites are present in the Bax{alpha} gene sequence (14,21). We used HpaII or MspI cleavage properties to determine the methylation profile of genomic DNA in Bax{alpha} or Bax{psi} tumors. Similar patterns of hybridization with both exon 1 and exon 3–4 probes were found in Bax{alpha} tumors but not in Bax{psi} tumors (Fig. 6A). Differences in methylation profiles between Bax{alpha} and Bax{psi} tumors were confirmed using bisulfite and nested primer set PCR (24). Our results indicate that all Bax CpG sites located between the TATA box and the first ATG were methylated in Bax{psi} (Fig. 6B), the latter region corresponding to putative c-myc promoter sites (13). Quite interestingly, whereas no methylation of this gene was observed in Bax{alpha} tumors, analyses of GBM which do not express Bax (Bax0 GBM) showed that all CpG islands were methylated (Fig. 6B). As a control of the methylation status of the genome in these tumors, we examined the methylation of p14ARF and p15INK4b. As illustrated in Figure 6C, p14ARF was methylated in Bax{psi} tumors but not in Bax{alpha} or in Bax0 GBM. On the other hand, p15INK4b was not methylated in any of these tumors (Fig. 6C).



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Figure 6. Methylation of Bax gene in Bax{alpha} and Bax{psi} tumors. (A) Genomic DNA from Bax{alpha} or Bax{psi} tumors was purified and digested with either HpaII or MspI before blotting and hybridization with exon 3–4 or exon 1 probe. Results are representative of three different experiments. (B) Methylation-specific PCR of Bax gene in Bax0, Bax{alpha} and Bax{psi} GBM. PCR was performed on genomic DNA purified from Bax0, Bax{alpha} and Bax{psi} expressing tumors, treated (T) or untreated (U) with bisulfite as described in Materials and Methods. Primer sets used for amplification are designated as wild-type (WT), unmethylated (U) and methylated. The sequence illustrated here as an example is located within the exon 1 of Bax gene. (C) Methylation-specific PCR of p14ARF and p15INK4b genes in Bax0, Bax{alpha} and Bax{psi} GBM. We used primers described by Hermann et al. (24) to analyze the methylation status of p14ARF and p15INK4b genes in GBM.

 
Effect of the expression of Bax{psi} on apoptosis and tumor growth
We analyzed, in primary cultures of tumoral cells obtained from Bax{alpha} and Bax{psi} GBM (see Materials and Methods), the intracellular localization of Bax by laser confocal microscopy. As shown in Figure 7A, Bax{alpha} presented a dual cytosolic/mitochondrial localization whereas Bax{psi} appeared to be essentially associated with the mitochondria. In both tumors, the antiapoptotic protein Bcl-2 appeared to be essentially mitochondrial.



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Figure 7. Comparative subcellular localization pro-apoptotic properties of Bax{alpha} and Bax{psi}. (A) Tumoral cells derived from Bax{alpha} or Bax{psi} tumors were prepared as described in Materials and Methods for confocal laser microscopy. Micrographs showing mitochondria (mitotracker, mitoT) (green fluorescence), Bax or Bcl-2 (red fluorescence) and merged pictures of the two labellings were obtained from either Bax{alpha} (top) or Bax{psi} (bottom) cells. (B) To compare the pro-apoptotic function of Bax{alpha} and Bax{psi}, 5 x 107 Bax0 GBM cells were electroporated with pRc-CMVBax{alpha} (closed bars) or pRc-CMVBax{psi} (open bars) as described in Materials and Methods. Expression of the Bax transgenes was analyzed using western blot using actin as internal standard (right). Apoptosis was assayed by determining the specific DEVDase and LDH activities after doxorubicin treatments of cells transfected with increased concentrations of Bax{alpha} or Bax{psi} encoding plasmids using transfection with 25 µg of pRc-CMV control plasmid as the background expression of DEVDase and LDH activities (left). Histograms show mean ± SD calculated from three different experiments using independent transfection experiments with primary cultures derived from two Bax0 GBM.

 
We obtained primary cultures from Bax0 GBM and transiently transfected these cells by electroporation with Bax{alpha} or Bax{psi} transgenes at different concentrations (see Materials and Methods). After 48 h of selection with G418, immunoblot analyses showed similar levels of Bax expression with Bax{alpha} or Bax{psi} transgenes (Fig. 7B). Apoptosis was then induced by a treatment with doxorubicin and quantified by measuring the release of cytosolic lactate dehydrogenase (LDH) into the culture medium or by assaying the cleaving of AC-DEVD-AMC by caspases within the cells as previously described (25). As illustrated in Figure 7B, both LDH released and cellular DEVDase activity were proportional to the quantity of Bax{alpha} or Bax{psi} transgenes expressed in Bax0 GBM cells. It should be noted that very little enhanced cell death was observed upon the expression of the Bax transgenes (either Bax{alpha} or Bax{psi}) in absence of a cell death inducer, suggesting an intrinsic high capacity of resistance to apoptosis in these cells. However, cells transfected with Bax{psi} were more sensitive to doxorubicin than those transfected with Bax{alpha} (Fig. 7B). Linear regression plots using data presented in Figure 7B indicated that using either caspase-3-like activity or LDH activity, Bax{psi} was 3.5x more apoptogenic than Bax{alpha}.

Effect of Bax{psi} on in vivo growth in athymic mice
We also analyzed the in vivo growth in the athymic nude mice using mock or Bcl-2-transfected Bax{alpha} and Bax{psi} cells as xenografts. As illustrated in Figure 8, the mock transfected Bax{alpha} xenografted tumors grew more steadily than the Bax{psi} counterparts. However, the expression of Bcl-2 transgene increased tumoral progression to the level of Bax{alpha} (Fig. 8). It should be noted that the expression of Bcl-2 did not affect the growth of Bax{alpha} tumors (Fig. 8). The latter results suggest that the slow proliferation of Bax{psi} tumors was due to the expression of Bax{psi} and not to unrelated factors co-expressed in these tumors.



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Figure 8. In vivo growth of Bax{alpha} and Bax{psi} tumors in nude mice. (A) 106 cells from Bax{alpha} or Bax{psi} tumoral cells transfected either by a human Bcl-2 or by the empty vector (pRcCMV) were injected subcutaneously into the thymus-less nude mice. Each type of cells was injected in six different mice per group, mock-transfected cells on the left flank and Bcl-2 transfected cells on the right flank, and GBM growth was followed by measuring the tumoral volume over a period of 25 days (left). The amount of Bcl-2 was assayed after the sacrifice of the animals by western blot using actin as internal standard (right). (B) Histograms show the evolution of the different tumors (mean ± SD). No difference was found for the growth of Bax{alpha} transfected or not with Bcl-2 (P = 0.605). On the other hand, significant difference was found between Bcl-2 transfected Bax{psi} tumors and the control ones (P = 0.001).

 
Similar results were obtained in clonogenicity experiments performed using primary cultures obtained from either Bax{alpha} or Bax{psi} patients. Less colonies were formed with Bax{psi} than with Bax{alpha} tumoral cells and this tendency was reversed in Bax{psi} cells transfected by Bcl-2 (data not shown).

Correlation between the expression of Bax{psi} and survival of GBM patients
The precedent results prompted us to determine whether the presence of Bax{psi} influenced the progression of GBM in vivo. We estimated the survival probabilities of patients bearing the {alpha} or {psi} variants of Bax by the method of Kaplan–Meier. Follow-up survival data were available for 13 Bax{psi} and 42 Bax{alpha} patients. As shown in Figure 9A, the survival of Bax{psi} patients was significantly increased compared to that of Bax{alpha} patients (18 versus 10 months, P = 0.019). On the other hand, no difference in the survival of these patients was observed in a similar analysis using a mutation of p53 versus wild-type p53 as variable (P = 0.90) (Fig. 9B) as shown previously by others (reviewed in 26). We have recently shown that the expression of Bax was closely correlated with that of Bcl-2 in human GBM (27). The ratio of Bax to Bcl-2, in Bax{psi} or Bax{alpha} tumors determined after quantification of the immunoblot was not different between Bax{alpha} and Bax{psi} tumors (data not shown). These results suggest that the increased survival of Bax{psi} patients was not due to a down-regulation of Bcl-2. It should also be noted that no significant differences in sex (male:female ratio Bax{alpha}, 23:19, 1.21; Bax{psi}, 7:6, 1.166), age (Bax{alpha}, 55.6 ± 13.5; Bax{psi}, 54.33 ± 14.5) or Karnofski index (Bax{alpha}, 78.06 ± 16.6; Bax{psi}, 86.92 ± 15.48), were found between the Bax{alpha} or Bax{psi} patients. All patients were treated using similar standard treatments, a combination of surgery, chemotherapy (Temodale and Vincristine) plus radiotherapy.



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Figure 9. Patients’ survival. The influence of the presence of Bax{alpha} versus Bax{psi} on patient survival was assessed by Kaplan–Meier analysis. (A) Significant differences were observed between the Bax{alpha} and Bax{psi} curves as calculated by a Mandel’s test ({chi}2 = 5, P = 0.019). (B) In contrast, no influence of a mutation of p53 on patients’ survival was observed in the same population ({chi}2 = 0.008, P = 0.90).

 

    DISCUSSION
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
We have found, in a previous work, that the Bax:Bcl-2 ratio did not affect patients, outcome in a series of astrocytoma of high and low grades (27). However, in the present work we found that Bax status differed in GBM as although a majority of tumors expressed p21Bax (42/55), 13 tumors (24%) expressed a variant of Bax with a molecular weight of 19 kDa (Fig. 1). We have confirmed by immunoblot and RT–PCR that p19 was related to p21Bax. Interestingly, two tumors lacked completely the expression of Bax transcripts (Figs 1 and 2). We showed by SMART RT–PCR that the p19Bax corresponded to a novel variant of Bax, Bax{psi}, resulting from a deletion in the 5' end of the Bax mRNA (Fig. 2). Bax{psi} is present in most human tissue examined (Fig. 3) and is a normal transcript of Bax in brain of 1.1 kb as confirmed by in vitro translation of mRNAs (Fig. 4). As Bax{psi} can be translated in vitro from mRNAs extracted from tissue which normally did not express this protein, we concluded that Bax{psi} was post-translationally regulated (Fig. 4). It is noteworthy that the two putative PEST sequence present in Bax{alpha} are encoded by exon 2 and thus are present in the N-terminus of Bax{psi} (search performed by Pestsearch at http://www.icnet.uk/LRITu/projects/pest). The latter result suggests that proteosomal degradation (28) could regulate Bax{psi} expression in most tissues as already demonstrated for Bax{alpha} in some prostate cancers (29). Several other mechanisms could intervene in the regulation of mRNA translation involving sequences located in mRNAs untranslated regions (reviewed in 30). These different hypotheses are currently under investigation in our laboratory.

Since the sequence of Bax{psi} mRNA starts within that of exon 1, it is unlikely to arise from a classical mechanism of alternative splicing. Thus, alternative transcription of Bax mRNA or changes in the sequences of the promoters of Bax in tumoral cells leading to gene silencing could be envisaged. Indeed, in support of the latter hypothesis, we found that the methylation status of the Bax gene is different in Bax{alpha} and Bax{psi} tumors (Fig. 6). Methylation is usually associated with the loss of gene expression (23) and this could explain the silencing of Bax{alpha} in Bax{psi} tumors (Fig. 6). Indeed, preliminary experiments suggest that treatment with the de-methylation agent 5-aza2dC triggers the transcription of Bax{alpha} mRNA in Bax{psi} tumoral cells (data not shown). However, hybridization patterns of the exon 1 and exon 2–3 probes with HpaII- and MspI-digested genomic DNA suggested also a rearrangement in DNA between Bax{alpha} and Bax{psi} tumors which could also be involved in the restricted expression of the variants of Bax and genomic PCR indicated that the 5' extremity of Bax gene was deleted in Bax{psi} tumors (Figs 5 and 6).

The translation of Bax{psi} mRNA starts at a methionine present at position 20 of Bax{alpha} sequence and thus leads to a N-terminal truncation of the protein. The importance of the first 20 amino acids of Bax{alpha} in its pro-apoptotic role has been demonstrated using genetically engineered mutants lacking the  N-terminus of Bax{alpha} (18). Bax{psi} exhibits a mitochondrial localization in vivo and an enhanced cytotoxicity in vitro (Fig. 7). This result is in good agreement with several recent studies which have pointed out the role of the N-terminus of Bax in its retention in the cytosol of healthy cells (1820). The limited expression of this highly apoptogenic form of Bax in tumors suggests that either the expression of Bax{psi} is restricted to tissues that are highly resistant to apoptosis or that apoptosis sensitive malignant or normal cells which express Bax{psi} are rapidly eliminated.

Experiments with Bax{alpha} or Bax{psi} xenografts indicated that Bax{psi} expression was associated by a reduced tumoral growth in vivo (Fig. 8). The fundamental role of Bax{psi} in the decrease of tumor growth is confirmed by experiments in which Bcl-2 transgene is expressed in Bax{psi} expressing cells (Fig. 8). The latter results suggest also that the improved survival of Bax{psi} patients when compared to Bax{alpha} ones (Fig. 9) is directly linked to Bax function(s). In addition, the expression of Bax{psi} is apparently not associated with a late occurring event in the glioma genetic pathway or to secondary GBM as Bax{psi}-positive tumors were also found in low grade astrocytomas and oligodendrogliomas (Table 2).

Interestingly, a specific isoform of Bax which lacks the first 20 amino acids of Bax{alpha} has been found expressed in ischemic tissues in rat (31). This result strongly suggests that Bax{psi} is involved in the regulation of apoptosis in the CNS under different pathological situations.

Bax inactivation due to mutations or enhanced degradation influences the response of human epithelial cancer cells to chemotherapy (32) and is an indicator of poor prognosis in several types of cancers (9,29). Our data show the first positive element to support the arguement that apoptosis is a key player in tumor progression and suggest that Bax and especially Bax{psi} could be important tools in future therapeutic strategies in human cancers.


    MATERIALS AND METHODS
 TOP
 ABSTRACT
 INTRODUCTION
 RESULTS
 DISCUSSION
 MATERIALS AND METHODS
 REFERENCES
 
Materials and tissue samples
Unless specified otherwise, all material used in this work was from Sigma. All culture material was from Gibco BRL.

Patients
Tumor samples were chosen from adult patients after surgical resection at the Department of Neurosurgery of the Hospital of Nantes over the years 1996–1999. Brain tumors were classified and graded according to the WHO system (15). PT tissue was obtained from normal brain tissue found at the periphery of the resected tumor or from control tissues from patients operated for other pathologies at the Department of Neurosurgery. RNAs purified from non-nervous tissues were obtained from Clontech (human panels I, II and III, K4000-1, K4000-2, K4000-3).

Patient material as well as records (diagnosis, age, sex, date of death) were used with confidentiality according to French laws and recommendations of the French National Committee of Ethic.

Methods
Western blots were performed using antibodies directed against the N-terminus of Bax{alpha} (amino acids 3–16, 2 µg/ml, R&D Systems, 2282-MC), Bax{alpha} exon 3 (amino acids 43–61, 2 µg/ml, Dako, A3533), C-terminus of Bax{alpha} (amino acids 150–165, 2 µg/ml, Oncogene, PC66), Bcl-2 (1 µg/ml, Dako, M-0887) and actin (0.5 µg/ml, Boehringer Mannheim, 138–996). The amount of immunoreactive protein was quantified using IPLab Gel Program (Signal Analytics) after scanning with an Appligene-Oncor Imager using actin as an internal standard. p53 mutants in patient samples were analyzed by immunoblots after non-denaturing gels using antibodies raised against wild-type p53 (Oncogene Research Products Ab-2) or mutated p53 (1 µg/ml, Santa Cruz, Pab240).

RT–PCR analyses and northern blot
Total RNA from control, tumoral or peritumoral tissue was prepared using RNA Isolator (Genosys-Sigma). The reverse transcription reaction was accomplished with 1 µg total RNA and MuMLV reverse transcriptase (Promega). The PCR reaction was performed using SMART RT–PCR cDNA Synthesis kit (Clontech) and primers SMART II (Clontech) and primers listed in Table 1. For the northern blots, 3 µg poly(A)+ RNA from different glioblastoma multiforme were separated in 1.5% agarose gel then transferred to nylon membranes (GeneScreen plus Dupont) in 10x SSC by capillary flow and baked at 80°C for 2 h. mRNA was hybridized with exon 3–4 or exon 1 probes synthesized with the ‘Ready to go’ kit from Pharmacia using [35S]dATP.

Southern blots and methylation PCR
Genomic DNA was prepared from tumors using standard methods. The extracted DNA was digested with restriction enzymes EcoRI and HindIII then 10 µg digest was separated in 1.5% agarose gel and transferred to Hybond+ membranes (Amersham). DNA methylation was assayed using HpaII and MspI digestion followed by Southern blotting. DNA probes for hybridization were obtained after PCR amplification and were labeled using [35S]dATP, exon 3–4 probe was obtained after PCR amplification (PCR primers, BAX3/4S and BAX3/4AS) and exon 1 probe after amplification with BaxN and BaxASe1 (5'-GAGACCCGACG-3'). Genomic DNA fragments obtained either from Bax{alpha} or Bax{psi} tumors were treated with the bisulfite modification kit from Appligene-Oncor according to the manufacturer’s instructions.

Cell culture, confocal analysis and induction of apoptosis
For cell culture, the tumors were mechanically dissociated using a Medimachine® (Dako) and 50 µm Medicons® (Dako). Cells were seeded in RPMI 1640 medium containing 10% fetal calf serum, L-glutamine, penicillin and streptomycin. One day after dissociation, cells were cultured in RPMI medium containing G5, L-glutamine, penicillin and streptomycin. Experimental data described in this study were obtained with cells obtained between the seven and 15 passages for all tumors examined (i.e. two of each Bax-deficient, Bax{alpha} and Bax{psi} tumors). For confocal analysis, the tumors were mechanically dissociated and then cultured for 7 days. Bax, Bcl-2 and Mitotracker green (Molecular Probes) were analyzed by laser confocal microscopy as previously described (25). Bax-deficient cells were electroporated with Bax{alpha} or Bax{psi} cDNAs and grown in the presence of G418 for 48 h prior to the induction of apoptosis with doxorubicin (2 µM) and LDH and DEVDase activities were measured as described previously (25). The clonogenicity experiments were performed on tumoral cells obtained from transfected Bax{alpha} or Bax{psi} tumors grown in RPMI/0.2% agar for 8 weeks and viable cells were visualized by staining with crystal violet.

In vivo experiments
Swiss nude mice were injected subcutaneously in the flank with 106 cells obtained from Bax{psi} or Bax{alpha} primary cultures transfected with either the empty plasmid (pRcCMV) or the plasmid encoding human Bcl-2 (pRcCMV-huBcl-2) and were selected as described above for Bax transfections. Tumoral progression was monitored and quantified by measuring the size of the tumors every week over a period of 25 days.


    ACKNOWLEDGEMENTS
 
We thank Drs P.Cuillière and C.Sagan (CHR Nantes) for the histopathological examination of tumors. We thank Prof.  R.Breathnach (U463 INSERM, Nantes), Dr Ph.Juin (U419 INSERM, Nantes), Dr G.Kroemer (IGR/CNRS, Villejuif) and Prof. J.C.Martinou (University of Geneva) for critical readings of this manuscript. We thank our colleagues of the CHU of Nantes for the non-nervous tumoral tissues (Prof. J.L.Harousseau, Prof. C.Laboisse and Dr M.Campone) and Dr O.Delattre (Insititut Curie, Paris) for the gift of neuroblastoma cell lines. P.F.C. was supported by a fellowship from the Ligue Départementale contre le Cancer Doubs/Montbeliard. This work was supported by grants from INSERM, the Association pour la Recherche sur le Cancer and the Ligue Grand Ouest contre le Cancer.


    FOOTNOTES
 
+ To whom correspondence should be addressed. Tel: +33 24 0084081; Fax: +33 24 0084082; Email: fval@nantes.inserm.fr Back


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