Human Molecular Genetics Advance Access originally published online on June 30, 2005
Human Molecular Genetics 2005 14(15):2181-2188; doi:10.1093/hmg/ddi222
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A previously unidentified amino-terminal domain regulates transcriptional activity of wild-type and disease-associated human GLI2


1Medical Genetics Branch, NHGRI, NIH, Bethesda, MD 20892-3717, USA, 2Department of Dermatology and Comprehensive Cancer Center, University of Michigan, Ypsilanti, MI, USA and 3Department of Pediatrics, Genetics and Genomic Medicine, Washington University, USA
* To whom correspondence should be addressed at: Medical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, 35 Convent DriveMSC 3717, Building 35, Room 1B-203, Bethesda, MD 20892-3717, USA. Tel: +1 3015947487 or 3014028167, Fax:+1 3014807876; Email: mmuenke{at}nhgri.nih.gov
Received May 9, 2005; Revised June 8, 2005; Accepted June 16, 2005
GenBank accession no. DQ086814
| ABSTRACT |
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Zinc finger-containing Gli proteins mediate responsiveness to Hedgehog (Hh) signaling, with Gli2 acting as the major transcriptional activator in this pathway in mice. The discovery of disease-associated mutations points to a critical role for GLI2 in human Hh signaling as well. Here, we show that human GLI2 contains previously undescribed 5' sequence, extending the amino-terminus an additional 328 amino acids. In vitro, transcriptional activity of full-length GLI2 is up to 30 times lower than that of GLI2
N (previously thought to represent the entire GLI2 protein), revealing the presence of an amino-terminal repressor domain in the full-length protein. GLI2
N also exhibits potent transcriptional activity in vivo: overexpression in mouse skin leads to the formation of Hh-independent epithelial downgrowths resembling basal cell carcinomas, which in humans are associated with constitutive Hh signaling. The discovery of this additional, functionally relevant GLI2 sequence led us to re-examine several pathogenic human GLI2 mutants, now containing the entire amino-terminal domain. On the basis of the functional domains affected by the mutations, mutant GLI2 proteins exhibited either loss-of-function or dominant-negative activity. Moreover, deletion of the amino-terminus abrogated dominant-negative activity of mutant GLI2, revealing that this domain is required for transcriptional repressor activity of pathogenic GLI2. Our results establish the presence of an amino-terminal transcriptional repressor domain that plays a critical role in modulating the function of wild-type GLI2 and is essential for dominant-negative activity of a GLI2 mutant associated with human disease. | INTRODUCTION |
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Properly regulated Hedgehog (Hh) signaling plays crucial roles in a variety of conserved embryonic processes underlying human malformation syndromes, whereas uncontrolled Hh pathway activation is associated with several neoplasms (1
During physiologic Hh signaling, secreted Hh proteins bind and antagonize the receptor Ptch on target cells, allowing the activation of the signaling effector Smo (3
). Smo operates through several cytoplasmic proteins to bring about changes in gene expression via Gli transcription factors. In Drosophila, the single Gli orthologue Ci functions as either a transcriptional repressor or Hh-dependent activator (4
), whereas in higher eukaryotes, Gli activity reflects the combined repressor and activator functions of all Gli proteins (Gli1, Gli2 and Gli3) present within the cell (5
,6
). Detailed analysis of various mouse mutants has led to several conclusions regarding Gli protein function in vivo: Gli1 is not required for normal Hh signal transduction; Gli2 acts primarily as a transcriptional activator but may have some repressor activity and Gli3 generally functions as a repressor but can be a weak activator in certain cellular contexts [(7
) and references therein]. In general, Gli2 appears to be the primary transcriptional activator mediating Hh responses in mice (8
16
). In contrast, Gli1 appears to be the primary effector in zebrafish, with Gli2 playing minor roles (17
), indicating functional divergence of Gli protein function among vertebrate species.
Both the basal level of Gli transcriptional activity and its modulation during Hh signaling are controlled by functional domains that have been characterized using a variety of experimental approaches. All wild-type Gli proteins contain carboxy-terminal activation domains and a more centrally located zinc finger DNA-binding domain (Fig. 1A). Ci and Gli3 (mouse and human) also contain amino-terminal domains that are involved in transcriptional repression in several physiological settings. Thus, in the absence of Hh, Ci functions as a potent transcriptional repressor due to proteolytic cleavage and accumulation of protein with intact DNA-binding zinc fingers and amino-terminus, but missing the carboxy-terminal transactivation domain (18
). Similarly, Gli3 appears to exist primarily as a truncated repressor missing the carboxy-terminus, with transcriptionally active full-length Gli3 accumulating only in cells responding to a Hh signal (19
21
). In contrast to Gli3, mouse and human Gli1 proteins do not contain amino-terminal repressor domains and appear to function only as transcriptional activators.
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Gli2, like Gli3, appears to be capable of functioning either as a transcriptional activator or repressor, depending on cellular context and species. Although reliable antibodies for detecting endogenous Gli2 protein are not available, carboxy-terminal deletion mutants of mouse Gli2 have been created which mimic the naturally occurring repressor forms of Gli3 and Ci in their ability to block transcriptional activity (22
| RESULTS |
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Interestingly, although the human GLI2 cDNA has been reported in previous studies (25
Isolation of the full-length human GLI2 cDNA
As recent database entries suggested that additional GLI2 sequence might exist, we directly examined this question by RTPCR using poly-A RNA (Clontech) from normal individuals. As described in Fig. 1C, we detected four additional coding exons that extend the previously described human GLI2 protein by 328 amino acids, which are highly homologous to the amino-terminal repression domains of Gli2 genes from other vertebrate species. For the sake of clarity, we will refer to previously described human GLI2 as GLI2* or GLI2
N, to reflect the finding that amino-terminal sequence was not included in these earlier reports.
Comparisons between full-length GLI2 and GLI2
N
We performed luciferase-based reporter assays in cultured cells to compare the transcriptional activity of GLI2* (GLI2
N) with that of full-length GLI2 or a full-length chimera containing the amino-terminus of mouse Gli2 (m/hGLI2) (Fig. 2A). Although GLI2 and m/hGLI2 efficiently stimulated reporter activity, they were substantially (up to 30-fold) less active than GLI2
N in assays using three different Gli-responsive reporters (Fig. 2 and data not shown). Similar results were obtained in mesenchymal C3H 10T1/2 cells (Fig. 2B) and epithelial WT7 keratinocytes (Fig. 2D and E). The amino-terminus of human GLI2 thus appears to contain a domain with transcriptional repressor activity similar to that previously described in mouse Gli2, and mouse and human Gli3 (26
). As an independent measure of Gli activity, Hh pathway-mediated induction of the osteogenic marker alkaline phosphatase was measured in cultures of C3H 10T1/2 cells. In keeping with the results of luciferase-based reporter assays, GLI2
N was much more effective than GLI2 or m/hGLI2 at inducing alkaline phosphatase activity in this bioassay (Fig. 2C). In addition, transgenic mice expressing GLI2
N in skin produced basal cell carcinoma-like downgrowths originating directly from epidermis (Fig. 2F), indicating that this protein is capable of activating cell proliferation in a Hh-independent manner similar to mouse Gli2
N and activated SMO but not full-length Gli2 (15
,27
,28
).
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Analysis of mutant forms of full-length GLI2
Our previous studies had identified mutations in the human GLI2 gene associated with ventral craniofacial, pituitary, limb and/or brain anomalies (26
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We first examined the intrinsic transcriptional activity of each mutant (Fig. 3B). With the exception of mutant mutA which is missing exon 5 (a theoretical alternatively spliced form not demonstrated experimentally), transcriptional activity of GLI2 mutants was undetectable using two different Gli-responsive reporters (Fig. 3B and data not shown). The residual activity of mutA is likely due to the fact that this is the only mutant possessing an intact carboxy-terminal transactivation domain. The reduced activity of mutA, compared with wild-type GLI2, is likely the result of impaired DNA-binding properties (30
NmutA (plasmid 2 in our previous report) was also a weak activator of skin tumor formation in frog embryo injection studies (26
MutB and mutC have dominant-negative properties
We next performed cotransfection studies to examine the overall Gli activity when GLI2 mutants were expressed together with wild-type GLI2. Responses fell into two general classes: strong, dominant-negative inhibition of wild-type GLI2 activity and modest stimulatory activity compared with GLI2 alone (Fig. 3A and C). Only those mutants with intact zinc fingers 4 and 5 (mutB and mutC), previously implicated in efficient DNA binding (30
), exhibited potent GLI2 inhibitory activity. mutD did not appreciably alter Gli reporter activity when cotransfected with wild-type GLI2 (Fig. 3C, bar 7), suggesting that this mutant is inactive; whereas cotransfection of mutA led to an
2-fold higher activity levels (Fig. 3C, bar 4), similar to those obtained with wild-type GLI2+ wild-type GLI2 cotransfection (Fig. 3C, bar 3). Interestingly, cotransfection of mutE or mutF with wild-type GLI2 (Fig. 3C, bars 8 and 9) led to modestly enhanced reporter activity compared with an equivalent amount of GLI2 alone (Fig. 3C, bar 2). Because these mutants have no intrinsic transcriptional activity (Fig. 3B) and are unlikely to bind DNA due to the absence of zinc fingers 4 and 5 (Fig. 3A), these results suggest that altered forms of GLI2 can influence wild-type GLI2 function indirectly, perhaps by competing with cellular factors involved in modulating repressor-domain function. Transmodulation of other GLI proteins by mutant GLI2 could account for the unanticipated finding of polydactyly, normally associated with heightened Hh signaling activity, in several of our families (26
,29
). The inability of mutD to enhance Gli activity may be related to the fact that it retains zinc fingers 14 and may therefore have sufficient DNA-binding activity to exhibit a low level of transcriptional repression.
Dominant-negative activity resides in the amino-terminus of GLI2
The results of these cotransfection experiments were in striking contrast to findings we previously reported using the amino-terminally truncated versions of these mutants, none of which exhibited dominant-negative activity (26
). We performed additional cotransfection assays to directly test whether the newly described repressor domain is involved in dominant-negative activity of disease-associated human GLI2 mutants. Cotransfection of wild-type GLI2 with mutC resulted in a dose-dependent inhibition of Gli reporter activity, with a >90% inhibition when equal amounts of the two effector plasmids were used (Fig. 5B). In striking contrast, cotransfection of wild-type GLI2 plasmid with
NmutC plasmid (missing the amino-terminal repressor), resulted in a negligible reduction in reporter activity compared with wild-type GLI2 plasmid alone. Immunoblot analysis confirmed that the loss of dominant-negative activity was not due to reduced expression of
NmutC protein compared with wild-type GLI2. On the contrary,
NmutC accumulated to levels several-fold higher than either wild-type GLI2 or mutC (Fig. 5C).
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| DISCUSSION |
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Our studies reveal a strong inhibitory effect of the newly described GLI2 amino-terminus on transcriptional activity of wild-type GLI2 and establish that this domain is essential for dominant-negative activity of a human GLI2 mutant associated with developmental abnormalities in humans (26
N) reported in previous expression studies (31Currently, haploinsufficiency for GLI2 is associated with disease in three families, whereas two additional families also show dominant-negative properties in the mutated GLI2 protein, reducing transcriptional activity even further. Although the number of identified cases is too small for extensive genotypephenotype correlations, the variable penetrance is striking, in particular the presence of polydactyly in isolation. Even mice with targeted disruption of Gli2 do not have digit abnormalities, unless Gli1 is also deleted. Furthermore, mice heterozygous for targeted disruption of Gli2 are reportedly healthy and fertile. This emphasizes both the similarities and the differences between vertebrate species in their relative utilization of the different Gli proteins.
On the other hand, our findings raise the interesting possibility that gain-of-function alleles of GLI2 also exist, in which pathogenic mutations may lead to loss of transcriptional repressor activity and consequent enhancement of Gli function. It now will be possible to perform mutational analysis of the GLI2 repressor domain in selected human cancers to determine whether somatic changes are associated with tumorigenesis.
| MATERIALS AND METHODS |
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Sequencing, molecular cloning and clinical studies
Once the direct sequencing of the RTPCR product cloned into pCR2.1 (Invitrogen) established the full-length GLI2 reading frame, a replacement cassette was designed with a unique 5' EcoR1site and the 3' unique Fse1 site within exon 2. This cassette was sub-cloned into the wild-type human GLI2 construct in pCS2(MT) as well as mutant forms previously described (26
Cell culture
C3H 10T1/2 cells were grown in Dulbecco's Minimum Essential Medium (MEM) supplemented with glutamine and 10% fetal bovine serum (FBS) (Invitrogen), in a 37° incubator at 5% CO2. The WT7 keratinocyte cell line arose spontaneously following repeated passaging of epidermal keratinocytes isolated from newborn mice according to standard procedures (33
). WT7 cells are grown in modified S-MEM (Sigma-Aldrich) containing 10% FBS and 1 ng/ml keratinocyte growth factor (PeproTech). FBS for keratinocyte culture was a mixture of Ca2+-depleted FBS (33
) and untreated FBS, in proportions yielding a final medium Ca2+ concentration of 0.05 mM for optimal keratinocyte growth.
Reporter assays
Lipofectamine plus (Invitrogen) was used according to the manufacturer's guidelines for all transfections, which were performed in six-well plates. When testing transcriptional activity of individual GLI plasmids, 0.7 µg of effector plasmid was used; when cotransfecting two GLI plasmids, we used 0.4 µg of each. Reporter plasmids, used at 0.4 µg/well, included 8xGliBS-luc and m8xGliBS-luc (34
); BCL2prom (1.9 kb) and BCL2prom (cont) (32
) and K17-luc, which contains 1950 bp of the Gli-responsive Keratin 17 promoter (35
) cloned into pGL3-basic (Promega). A control plasmid (pSV-lacZ, 0.1 µg) was included in each reaction to normalize for transfection efficiency. Two days after transfection, cells were harvested in CCLR buffer (Promega) and luminescence measured in a Monolight 3010 luminometer. Assay results were normalized to ß-galactosidase activity, determined using a colorimetric assay. For in situ assessment of alkaline phosphatase activity in C3H 10T1/2 cells, cultures were fixed 24 h after transfection and an alkaline phosphatase Vectastain kit (Vector Labs) was used to visualize enzyme activity.
Immunoblot analysis
Immunoblotting studies were performed using cell lysates prepared for luciferase assay, following addition of Laemmli sample buffer, denaturation, SDSpolyacrylamide gel electrophoresis and transfer to PVDF membrane. Lysate volumes were adjusted based on results of colorimetric ß-galactoside activity to normalize for transfection efficiency. Filters were incubated with monoclonal anti-MYC antibody 9E10 to detect MYC-tagged GLI2 proteins and anti-ß-galactosidase antibody as a control. Visualization was performed using secondary antibodies (Jackson Immunoresearch) conjugated to horseradish peroxidase, followed by incubation with ECL reagent (Pierce) for chemiluminscent detection.
Production of transgenic mice
Expression of GLI2
N was targeted to skin using a transgenic cassette containing 5.3 kb of bovine K5 promoter, which is active in proliferative basal cells in epidermis and several other stratified epithelia and the outer root sheath of hair follicles (36
). DNA was injected into (C57BL/6 X SJL)F2 oocytes and transferred to pseudopregnant females by personnel in the University of Michigan Transgenic Animal Model Core.
| ACKNOWLEDGEMENTS |
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We are grateful to the families who participated in these studies and the DIR NHGRI for their support (E.R. and M.M.). We thank Drs Pierre Coulombe, Jose Jorcano, Fritz Aberger and Hiroshi Sasaki for providing reagents and Drs Brian Bonish and Mark Hutchin for performing preliminary experiments. We appreciate constructive comments on the manuscript from Drs Sarah Millar, Eric Fearon, Mikhail Nikiforov and Marisol Soengas. Support was provided by NIH grants CA87837 and AR45973 (A.A.D.).
Conflict of Interest statement. None declared.
| FOOTNOTES |
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The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors. | REFERENCES |
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isoform (now designated GLI2* or GLI2






