Lysosomal acid lipase (LAL) gene mutations were identified in three patients with cholesteryl ester storage disease (CESD). Direct sequencing of genomic DNA revealed that: patient 1 was a compound heterozygote for a P181L mutation and an A to G 3' splice site substitution that causes skipping of exon 7, with a loss of 49 amino acids from LAL ([Delta]205-253); patient 2 was a compound heterozygote for a G66V mutation and a 5' splice site mutation (G to A) that leads to skipping of exon 8 ([Delta]254-277); and patient 3 was a compound heterozygote for a L273S mutation and an unidentified null allele. Furthermore, patients 2 and 3 showed a novel G-2A polymorphism that could be detected by an XbaI restriction fragment length polymorphism. All these mutants and a previously reported H274Y allele were expressed in vitro in HeLa cells using the vaccinia T7 expression system. The resulting recombinant proteins were inactive towards cholesteryl oleate and trioleylglycerol, demonstrating the direct involvement of these mutations in the pathogenesis of CESD. Immunoblotting of normal LAL expressed in HeLa cells revealed four major molecular forms, at least two of high molecular mass (54 and 50-51 kDa) and two of low molecular mass (42 and 43 kDa). L273S and P181L substitutions and [Delta]254-277 were shown to result in altered LAL molecular forms, some of which suggest that post-translational processing may interfere with the catalytic activity of LAL.
Lysosomal acid lipase (LAL; acid cholesteryl ester hydrolase) is a key enzyme involved in intracellular hydrolysis of cholesteryl esters and triglycerides that have been internalized via receptor-mediated endocytosis of lipoprotein particles (1 ). In this process, the released free cholesterol regulates the endogenous synthesis of cholesterol, the uptake of low density lipoprotein and cholesterol esterification (1 ). The importance of LAL in the regulation of intracellular cholesterol flux is supported further by the fact that altered LAL function has been implicated in the development of atherosclerosis in the population at large (2 ,3 ).
Molecular cloning of the cDNA for LAL has revealed significant amino acid similarity with human gastric lipase and rat lingual lipase, indicating that these enzymes belong to a common family of acid lipases (4 ). LAL has been mapped on human chromosome 10 and the genomic locus consists of 10 exons spread over 36 kb (5 ,6 ).
The deduced amino acid sequence indicated that LAL has 378 amino acids, with an estimated Mr of 42.5 kDa, which include six putative N-glycosylation sites and a 21 amino acid N-terminal signal peptide (4 ). Human LAL has been purified from different sources and attributed different molecular sizes. In fact, two human hepatic acid lipases with Mrs of 29 and 58 kDa (7 ,8 ) or 41 and 56 kDa (9 ) respectively have been described. By contrast, two molecular forms of 41 and 49 kDa have been detected in fibroblasts (10 ) and, more recently, LAL expression in baculovirus produced two molecular forms of 46 and 41 kDa (11 ). Some of the different molecular forms seem to result from post-translational processing involving both glycosylation and selective proteolysis (9 -11 ).
Deficiency of lysosomal acid lipase occurs in two autosomal recessive storage disorders, cholesteryl ester storage disease (CESD) and Wolman disease. In Wolman disease, death usually occurs before the age of 6 months, and massive, widespread intracellular storage of both cholesteryl esters and triglycerides can be observed mainly in the liver, adrenal glands and intestine (1 ). On the contrary, patients with CESD have a more benign phenotype. Hepatomegaly may be noted during childhood, and often hypercholesterolaemia and hypertriglyceridaemia develop. In some patients, the hepatomegaly may progress to hepatic fibrosis or overt liver cirrhosis. Reduced or absent enzymatic activity of LAL in peripheral blood leucocytes, cultured skin fibroblasts or liver biopsy constitutes the diagnosis of LAL deficiency (1 ).
Several mutations have been reported in patients with LAL deficiency. A splicing defect resulting in a loss of 24 amino acids has been observed in three unrelated patients with CESD (12 -14 ). Point mutations resulting in single amino acid substitutions have also been described (6 ,15 ), and in two cases insertion or deletion of nucleotides in LAL cDNA changes the reading frame introducing a premature stop codon (6 ,13 ). None of these studies analysed the enzymatic activity of the LAL mutants expressed in mammalian cells. This is particulary important since the sorting of LAL to the lysosomes is achieved by a complex mechanism characteristic of these cells which does not take place in other systems, e.g. insect cells (16 ).
We previously have reported a family in which the homozygosity for H274Y replacement in LAL caused CESD (17 ). In the present study, the molecular basis of LAL deficiency was investigated further in three additional patients affected by CESD, leading to the identification of three different novel missense mutations and a new splicing defect. In addition, we have expressed these LAL mutants in a mammalian system in order to characterize the different molecular forms of the proteins expressed, as well as to know how the mutations affect the catalytic efficiency.
Mutant alleles responsible for LAL deficiency in CESD patients were first identified through nucleotide sequencing of single clones derived from reverse transcription-polymerase chain reaction (RT-PCR) of LAL mRNA. The presence of each mutation in genomic DNA and the pattern of inheritance in each family were then analysed by direct sequencing of genomic DNA. For RT-PCR, total RNA isolated from liver tissue, cultured fibroblast cells or peripheral leucocytes obtained from the three CESD patients was reverse transcribed and amplified with F1 and RC1274 primers and compared with a normal control (Fig. 1 ). The expected band of 1274 bp, corresponding to the entire coding region of LAL, was present in all cases. However, patients 1 and 2 showed two additional smaller bands (Fig. 1 , lanes 1 and 2 respectively). The bands of either normal or small size from the three CESD patients and the normal control were eluted from the agarose gel and cloned. In each case, at least five independent clones were isolated and entirely sequenced.
Sequence analysis of the smaller sized cDNA from patient 1 revealed the absence of the 147 bp of exon 7 (Fig. 2 a) which results in the loss of amino acids 205-253 ([Delta]205-253). To investigate the genomic alteration leading to synthesis of this cDNA, the exon-intron junctions of exon 7 were analysed. Genomic DNA from the patient was amplified with ex7F and ex7R and sequenced. Patient 1 was found to be heterozygote for a A -> G substitution in intron 6 (Fig. 2 b). This substitution is located in position -2 of the 3' splice acceptor site, suggesting a splicing defect that leads to skipping of exon 7. In the same patient, sequencing of normal sized cDNA revealed in all clones a C -> T mutation at nucleotide position 645, which predicts a missense substitution P181L. The C -> T substitution of LAL mRNA is located in exon 6. LAL exon 6 DNA from patient 1 was amplified with ex6F and ex6R primers. Direct sequencing of the resulting PCR products revealed that the proband is heterozygote for this missense mutation (Fig. 2 c). Therefore, patient 1 is a compound heterozygote for a missense substitution (P181L) and for a 3' splice site mutation that causes skipping of exon 7.
In patient 2, sequencing of the normal sized cDNA revealed a G -> T substitution at nucleotide position 300 in all clones, predicting a G66V change, whereas sequencing of the smaller sized cDNA revealed the absence of 72 bp corresponding to exon 8 which results in the loss of 24 amino acids of the protein ([Delta]254-277). In addition, the normal sized cDNA clones presented a G -> A polymorphic variant at position 107 that creates a new XbaI site in exon 2 of the LAL gene (see below).
Direct sequencing of the PCR product derived from amplification of exon 4 showed that the patient was heterozygote for G66V (Fig. 3 ). Direct sequencing of exon 8 and the corresponding intron-exon junctions revealed a previously reported G -> A mutation in the last nucleotide of exon 8 that suggests a 5' splice donor site defect, with a consequent skipping of exon 8 ([Delta]254-277) (12 ). The above analysis indicated that patient 2 is a compound heterozygote for G66V and a 5'splice site mutation.
In the normal sized cDNA of patient 3, a single T -> C mutation at nucleotide position 921 was observed consistently in the DNA sequence of eight cloned PCR products from independent PCR reactions. This T -> C transition results in the change L273S. In addition, all the clones revealed the same G -> A polymorphism at position 107 detected in patient 2. This missense substitution changes the amino acid G-2A and creates a new XbaI site in exon 2 of the LAL gene. Subsequent experiments showed that this substitution is a common polymorphism present in the population with an allelic frequency of 0.19 (estimated from the analysis of 30 normal subjects). The segregation of L273S was investigated in family members. Direct sequencing of the PCR product of exon 8 revealed that the patient is a heterozygote for this substitution (Fig. 4 a). The same substitution was observed by direct sequencing of exon 8 in one of the mother's alleles, while the father was normal (data not shown).
In order to assess the functional significance of the six mutations detected in CESD patients (five reported in this study and H274Y reported previously) (17 ), we performed transient expression in HeLa cells with the T7 vaccinia expression system. This system was chosen because the vaccinia infection has the advantage of reducing the background deriving from both endogenous LAL and other fatty acyl hydrolase activities, which is not the case when classic eukaryotic expression vectors are used (4 ). Furthermore, eukaryotic proteins made in vaccinia virus-infected cells are properly processed, glycosylated and targeted to their correct cellular location (18 -20 ).
In order to distinguish the transfected LALs from the endogenous one, the recombinant proteins were tagged with a herpes simplex virus (HSV) epitope that was added to the carboxy-terminus of LALs (see Materials and Methods). The cells were also co-transfected with a chloramphenicol acetyltransferase (CAT)-containing vector as an internal control of transfection efficiency. Cell extracts were assayed for acid lipase activity and Western blotted.
Immunoblotting using an anti-HSV antibody showed four major molecular forms of normal LAL: two of higher apparent Mr (54 and 50-51 kDa) and a double band at 42-43 kDa (Fig. 5 , pLAL). The two missense substitutions G66V and H274Y presented the same pattern as normal LAL, while in the P181L mutant, the two forms of 54 and 50-51 kDa were strongly decreased (Fig. 5 ). In L273S an even higher Mr form of 56 kDa was observed consistently in several experiments. The immunoblots of [Delta]254-277 and [Delta]205-253 demonstrated the presence of proteins smaller than normal LAL. The [Delta]254-277 mutant showed two major bands at 49 and 40-41 kDa, while the [Delta]205-253 gave bands at 49 and 38-40 kDa (Fig. 5 ). Due to the deletion of 24 and 49 amino acids, the expected reduction in size for [Delta]254-277 and [Delta]205-253 is of 2.5 and 5 kDa respectively. The molecular sizes observed for [Delta]205-253 are compatible with such a deletion of all the LAL forms. On the contrary, the high Mr form of 49 kDa detected for [Delta]254-277 was smaller than expected. In the same sample, the low molecular mass forms seemed normally deleted.
The different recombinant LAL proteins were assayed for their cholesteryl esterase and triacylglycerol hydrolase activity in vaccinia-infected HeLa cells transfected with normal and mutated LALs. Transfection with normal LAL increased both activities 8-10 times above the level obtained after transfection with the control plasmid alone (Fig. 6 ). The lipase activity in the control extracts was 2.5 +- 0.8 and 8.1 +- 1.1 pmol/[mu]g protein per h for cholesteryl oleate esterase and trioleylglycerol hydrolase, respectively. The polymorphic LAL with the G-2A allele as well as LAL tagged with HSV had the same activity as normal LAL without the HSV epitope, indicating that neither the HSV epitope nor the polymorphic substitution interfered with the catalytic functions. On the contrary, all the other LAL mutants were inactive both towards cholesteryl oleate and trioleylglycerol (Fig. 6 ).
Here we describe the molecular basis of CESD in three patients. Mutations were identified by sequence analysis of LAL cDNA and genomic DNA, and their role as the direct cause of the disease was confirmed by measuring the enzymatic activity of extracts from cells transfected with these LAL mutants. The three CESD patients were found to be compound heterozygotes. Altogether we have identified three different missense mutations, two splicing defects that do not alter the open reading frame and a null allele.
The A -> G substitution at the AG 3' splice site consensus sequence of intron 6 that was detected in patient 1 results in skipping of exon 7 with a loss of 49 amino acids from LAL (Fig. 2 a and b). Four cysteine residues and a putative N-linked glycosylation site are expected to be missing from the resulting [Delta]205-253 protein. The P181L and G66V substitutions, detected in patients 1 (Fig. 2 c) and 2 (Fig. 3 ) respectively, are located within regions of LAL highly conserved in the two related lingual and gastric lipases. On the contrary, the leucine at position 273 that changes to serine in patient 3 (Fig. 4 a) is not conserved among this group of proteins.
Patient 1 is a male from southern Italy with clinical manifestations of CESD. The patient is the second child of healthy unrelated parents. His sister and parents were asymptomatic. At the age of 5 years the patient presented hepatomegaly, elevated liver function test hypercholesterolaemia and hypertriglyceridaemia. At the age of 10 years, a liver biopsy revealed cirrhosis with vacuolization and massive storage of birefringent material in hepatocytes. LAL activity was measured in leucocytes isolated from members of the family, both parents showing a reduced level. At the age of 11, orthotopic liver transplantation was performed and the patient is well 2 years after the procedure.
Patient 2 is a male from Sicily and presented hepatosplenomegaly at the age of 6 years. Hypercholesterolaemia and hypertriglyceridaemia were noted at the age of 21 years, and a liver biopsy revealed widespread vacuolized hepatocytes. LAL deficiency was diagnosed in liver biopsy, cultured skin fibroblasts and peripheral leucocytes. Only cultured skin fibroblasts were available for subsequent analysis.
Patient 3 presented with hepatosplenomegaly at the age of 5 years. Mildly elevated liver function tests, hypercholesterolaemia and hypertriglyceridaemia were noted at 15 years of age. The diagnosis was confirmed by increased cholesteryl ester content of a liver biopsy and by a decreased LAL activity of a cultured fibroblast cell line. The parents were asymptomatic. Subsequent analysis was carried out on DNA and RNA extracted from frozen blood from the propositus and his parents.
Fibroblast cell lines were grown in Dulbecco's modified Eagle medium (DMEM) containing 10% fetal bovine serum (FBS) and 500 [mu]g/ml gentamycin. Total RNA was extracted from frozen liver tissue obtained during liver transplantation (patient 1), from cultured skin fibroblasts (patient 2), from peripheral leucocytes (patient 3) and from normal skin fibroblasts (controls) by the acid guanidinium thiocyanate-phenol-chloroform method (23 ). Genomic DNA was extracted from the same samples with standard procedures (24 ). The synthesis of cDNA was carried out in a 50 [mu]l reaction volume containing 1-10 [mu]g of total RNA, 2.5 pM of random primers and Moloney leukaemia virus reverse transcriptase (BRL), used under the conditions suggested by the suppliers with the omission of dactinomycin.
Amplification of first strand cDNA was performed using Taq polymerase (Boeringher Manneheim) according to Saiki et al. (25 ). Ten [mu]l of the first strand cDNA mixture were incubated in a total volume of 100 [mu]l with 50 pM of each corresponding set of oligonucleotides and 5 U of Taq polymerase for 35 cycles (45 s at 93oC, 60 s at 52oC and 90 s at 72oC). The same amplification conditions were used to amplify genomic DNA and for the construction of HSV LAL clones. The sequence of the oligonucleotides used in PCRs of genomic DNA and for RT-PCR were as follows: LAL F1, ACTGCGACTCGAGACAGCGGC; LAL F895, TGCTGGAACTTCTGTGCA; LAL RC1057, ACTGCAGTCGGCACAAGCAT; LAL RC1274, ATAAGCTTGGTGGTACACAGCTCAAGT; ex2F, GTGGGAGCATTAAGTTACC; ex2R, TGGATCGGGAAATAGATGC; ex4F, GAAGCTTGGTGCTACTGCC; ex4R, CTGGAAGCCTGTTGTCTGC; ex6F, GGAAATCCCAGATGATGG; ex6R, TCTCAGGAGGAAATCTGC; ex7F, TATGCACCAGAGTGAAATGC; ex7R, AGTTCTGATGAGGTCATTCC; ex8F, TCAATGCCACCTTAATGC; ex8R, GGAAAGGGTTTTGCATGCC; J1, ACCTCCGCCAGATCCCTGATATTTCCTCATTAGA; HSV1, GGATCTGGCGGAGGTCAGCCTGAACTCGCTCCAG; HSV2, GATCCCTGCAGAGGT- CAGG.
Plasmid DNA, purified on miniprep Spun Columns (Pharmacia Biotech, Sweden), or PCR products, purified on a MicroSpin S400 HR column (Pharmacia Biotech, Sweden), were sequenced according to the dideoxy chain terminating method (24 ) using [[alpha]-35S]dATP and modified T7 DNA polymerase (Pharmacia Biotech, Sweden).
The G -> A substitution in position 107 that changes the amino acid Gly to Arg in position 2 creates a new XbaI site in exon 2 of the LAL gene. For the analysis of this polymorphism, genomic DNA was amplified with ex2F and ex2R primers, the resulting product was digested with XbaI and resolved on 2% agarose gel. Digestion of the 242 bp exon 2 DNA at the polymorphic XbaI site produced 143 and 99 bp fragments.
Normal LAL cDNA was synthesized by RT-PCR on RNA from normal fibroblasts using the primers LALF1 and LALRC1274, and the resulting fragment was digested with XhoI-HindIII and cloned in pBS SKvector. The nucleotide sequence was verified by sequencing. In order to distinguish the endogenous from transfected LAL, all the constructs were tagged with an 11 amino acid peptide (EPELAPEDPED) derived from HSV glycoprotein D. This peptide was linked to the carboxyl end of LAL by a five amino acid connecting segment (GSGGG), using the PCR-based overlap extension method (27 ). Firstly, normal LAL was amplified with LALF895 and J1, and pGDtag (a plasmid containing the sequence coding for the HSV peptide followed by a stop codon) was amplified with HSV1 and HSV2. Secondly, the two resulting fragments were joined, reamplified with LALF895 and HSV2, digested with PstI and cloned in pBS vector. The resulting plasmid contains the 3' end of LAL in-frame with the connecting segment and the HSV epitope. This insert was PstI subcloned in the normal and mutant LAL constructs, replacing the normal 3' coding region of LAL with the tagged one. A 397 bp BamHI fragment containing the polyadenylation signal of pRC/CMV was then added to the 3' end of LALs by subcloning into the NotI site. The nucleotide sequences of the cloned junctions and PCR amplified regions were verified by sequencing.
Recombinant vaccinia virus vTF7-3, bearing the bacteriophage T7 1 gene, was a generous gift of T. Fuerst and B. Moss (19 ). HeLa cells were grown in DMEM containing 10% FBS in 6 cm plates. Cells at 80% confluence were infected with vTF7-3 at a multiplicity of 30 plaque-forming units per cell, in serum-free medium. The virus was allowed to adsorb for 30 min at 37oC, with occasional rocking of the plate. The inoculum was then removed and replaced with 5 ml of serum-free medium. Cells were transfected with 2.8 [mu]g of each LAL plasmid DNA plus 0.2 [mu]g of a CAT-expressing plasmid (pULB), complexed with 20 [mu]g of cationic liposome DOTAP (Boeringher Manneheim). CAT activity was determined in all samples according to a standard procedure (24 ), and only efficient transfections were analysed further. Cells were harvested at 16-24 h after infection-transfection. In each experiment, controls consisting of vaccinia-infected cells transfected with pULB and of non-infected cells were included. After being harvested, cells were resuspended with 0.16 ml of 100 mM sodium acetate buffer (pH 4.8) containing the protease inhibitors leupeptin (15 [mu]g/ml), aprotinin (15 [mu]g/ml), pepstatin (5 [mu]g/ml), phenylmethylsulphonyl fluoride (0.25 mM) and EGTA (0.7 mM), at 0oC. Cell extracts were prepared by sonication for 10 s at an amplitude of 10 [mu]m (Soniprep 150, MSE), and the subsequent addition of Triton X-100 [0.2% (w/v) final concentration). The reaction mixtures, modified from Ameis et al. (9 ), contained cell extract (30-50 [mu]g of protein), 100 mM sodium acetate buffer (pH 4.8), 0.2% (w/v) Triton X-100 and either cholesteryl [14C]oleate (0.2 mM, 5 mCi/ml) or tri-[14C]oleyl-glycerol (0.3 mM, 5 mCi/ml), in a total volume of 0.1 ml. After incubation at 37oC for 30 min, the reaction product ([14C]oleate) was separated by extraction of the reaction mixtures with benzene-chloroform-methanol (10:5:12 by vol.) containing 0.3 mM oleic acid, as described by Pittman et al. (28 ). The aqueous upper phases containing the partitioned [14C]oleate were counted for [beta]-radioactivity. Cholesteryloleate esterase and trioleylglycerol hydrolase activities are expressed as relative to the activity of vaccinia-infected cells transfected with the pULB (control plasmid), taken as 1.
SDS-PAGE was performed according to the method of Laemmli (29 ). Extracts of HeLa cells (40 [mu]g protein) expressing normal or mutant LALs were resuspended in denaturing sample buffer containing 4% SDS and 3% dithiothreitol. After 5 min at 100oC, the samples were loaded on to 12% polyacrylamide gels and subjected to electrophoresis. Western blotting of the proteins to nitrocellulose membrane was performed for 2 h at 200 mA. After transfer, the membranes were stained with Ponceau Red S, washed and blocked for 1 h in Tris-buffered saline containing 5% skimmed milk. Tag antigens were detected using an HSV tag monoclonal antibody (Novagen, Madison, WI) followed by an alkaline phophatase-conjugated goat anti-mouse IgG.
Human Molecular Genetics
Pages
Introduction
Results
Analysis of the LAL mRNA by RT-PCR
Identification of LAL mutants in patient 1
Identification of LAL mutants in patient 2
Identification of LAL mutants in patient 3
Expression of recombinant LAL proteins tagged with HSV
Acid lipase activities of recombinant LAL proteins
Discussion
Materials And Methods
Subjects
Fibroblast cell lines, nucleic acids extraction and cDNA synthesis
PCR amplification, oligonucleotides and DNA sequence analysis
Identification of XbaI polymorphism in genomic DNA
Construction of HSV-tagged LAL mutants
In vitro expression of LAL mutants and measurement of acid lipase activity
Immunoblotting
References
REFERENCES
This page is maintained by OUP admin. Last updated Thu Oct 31 15:27:49 GMT 1996. Part of the OUP Journals World Wide Web service.Copyright Oxford University Press, 1996





