| Human Molecular Genetics | Pages |
Functional screening and complex traits: human 21q22.2 sequences affecting learning in mice
Introduction
An Increased Dose Of 21q22.2 Gives Defined Phenotypes
Behavioral Analysis Of The In Vivo Library
Neuroanatomical And Neurophysiological Analysis Of The In Vivo Library
Localizing A Gene Involved In Learning And Memory
Dyrk Is Responsible For The Learning And Memory Deficits
Conclusions
References
Functional screening and complex traits: human 21q22.2 sequences affecting learning in mice
Libraries of the mammalian genome have generally been propagated in single cells and have been used for gene discovery through in vitro analyses. We have expanded upon this concept by the creation of panels of YAC transgenic mice propagating targeted megabase regions of the genome. Such a panel of mice can be called an `in vivo library' and genes can be identified based on functional screens of members of the library. To test this approach, we created a 2 Mb in vivo library of human chromosome 21q22.2. Analysis of the library has revealed that one 570 kb YAC, in two separate founder lines, was associated with distinct learning deficits compared with the other 21q22 YAC transgenics and non-transgenic control animals. We have localized the gene on the YAC that causes the deficits by taking advantage of fragmentation of the YAC during the process of microinjection. The responsible gene is the human minibrain gene, and the homolog of the gene in Drosophila is also associated with learning defects. These results suggest that altered dosage of minibrain is associated with abnormal neural development in flies and mice and, in humans, may also be involved in the molecular pathology of Down syndrome. The clear challenge facing the post-genome world is the task of `functional genomics', interpreted here as understanding how the genes discovered from DNA sequencing function in the living organism. This challenge has already given rise to ingenious innovations focusing on how arrays of genes interact to control each other at the level of transcription ( Approaches which have provided information on gene function in the mouse include gene targeting and transgenesis of single genes. Although insightful, these approaches suffer from low throughput. Recent technical innovations in large insert transgenesis ( To examine genotype/phenotype in a candidate region of the genome, panels of mice containing large inserts from this region are created ( As an initial foray into the use of in vivo libraries, we have concentrated on a 2 Mb region on the long arm of human chromosome 21 at 21q22.2. There is evidence, albeit controversial, that an extra copy of this segment of chromosome 21 is sufficient to cause many of the phenotypic features of Down syndrome (
Figure
Figure
An in vivo library of this 2 Mb region of the human genome was created using four YACs spanning the region of interest ( Because the spectrum of genes involved in learning and memory are still largely unknown, and the deficits in these processes are amongst the most important practical consequences of Down syndrome, the learning and memory of the 21q22.2 in vivo library was investigated (
Figure
Hippocampal long-term potentiation has been proposed as an in vitro electrophysiological correlate of learning and memory. Based on this, we investigated hippocampal long-term potentiation in the brains of mice belonging to the in vivo library. No abnormalities were shown by any of the groups of animals, suggesting that if an electrophysiological defect does exist, it may reside in a region of the brain other than the hippocampus. The lack of electrophysiological defects observed in any members of the library prompted an analysis of the neuroanatomic pathology of the library. Interestingly, this revealed that animals containing YAC 230E8, which displayed the mild defects in learning and memory, showed a significantly increased density of neurons in the cerebral cortex. This abnormal density of neurons may explain the learning and memory deficits of these animals. Both learning deficits ( To localize the gene responsible for the learning and memory deficits of mice containing YAC 152F7, advantage was taken of the observation that fragmentation of the lengthy YAC DNA occurs during handling for microinjection. This leads to a panel of animals that contains random fragments of the YAC, in addition to animals containing the full length unrearranged YAC (Fig. The only gene that appears to be present in the 180 kb telomeric region ( The DYRK gene is >100 kb and is the human homolog of the Drosophila gene minibrain ( By using an in vivo library of large insert transgenic animals containing DNA from human chromosome 21q22.2, together with a functional assay, we have demonstrated that it is possible to sift through a large genomic region and identify distinct sequences affecting learning. Our findings that two different YAC transgenes cause distinct learning defects are consistent with studies in humans suggesting that several different loci may contribute to the learning deficits resulting from an extra chromosome 21 ( As the sequencing of the human genome begins in earnest, it is clear that the task that will confront us is to understand how networks of genes contribute to development and physiology in health and disease. This is exemplified by the contemporary interest in complex trait analysis, both for its basic theoretical interest and practical ramifications (
INTRODUCTION
AN INCREASED DOSE OF 21q22.2 GIVES DEFINED PHENOTYPES
BEHAVIORAL ANALYSIS OF THE IN VIVO LIBRARY
NEUROANATOMICAL AND NEUROPHYSIOLOGICAL ANALYSIS OF THE IN VIVO LIBRARY
LOCALIZING A GENE INVOLVED IN LEARNING AND MEMORY
DYRK IS RESPONSIBLE FOR THE LEARNING AND MEMORY DEFICITS
CONCLUSIONS
REFERENCES
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Oxford University Press, 1997
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