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It was recently found that aggregates of an NH2-terminal fragment of mutant huntingtin are localized to dystrophic neurites and intranuclear inclusions in the HD brain [DiFiglia, M., Sapp, E., Chase, K.O., Davies, S.W., Bates, G.P., Vonsattel, J.P. and Aronin, N. (1997) Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain. Science 277, 1990-1993; Becher, M.W., Kotzuk, J.A., Davies, S.W., Bates, G.P., Price, D.L. and Ross, C.A. (1997) Intranuclear neuronal inclusions in Huntington's disease and dentatorubral and pallidoluysian atrophy: correlation between the density of inclusions and IT15 CAG triplet repeat length. Neurobiol. Dis., in press). Dysfunction in retrograde transport may lead to dystrophic neurites [DiFiglia et al. (1997) Science 277, 1990-1993; Sahenk, Z. and Lasek, R.J. (1988) Inhibition of proteolysis blocks anterograde-retrograde conversion of axonally transported vesicles. Brain Res. 460, 199-203], which is consistent with our proposal that HAP1 and huntingtin may play a role in retrograde vesicle trafficking, and that the mutation in huntingtin may alter this function.