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Human Molecular Genetics, 2003, Vol. 12, No. 13 1507-1522
DOI: 10.1093/hmg/ddg174
© 2003 Oxford University Press

True XP group E patients have a defective UV-damaged DNA binding protein complex and mutations in DDB2 which reveal the functional domains of its p48 product

Vesna Rapic-Otrin1,{dagger}, Valentina Navazza2,{dagger}, Tiziana Nardo2, Elena Botta2, Mary McLenigan3, Dawn C. Bisi1, Arthur S. Levine1,* and Miria Stefanini2

1Department of Molecular Genetics and Biochemistry, University of Pittsburgh School of Medicine, and University of Pittsburgh Cancer Institute, Pittsburgh, PA 15213, USA, 2Istituto di Genetica Molecolare CNR, Via Abbiategrasso, 207-27100 Pavia, Italy and 3Section on DNA Replication, Repair and Mutagenesis, National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892-2725, USA

Received February 14, 2003; Revised May 2, 2003; Accepted May 7, 2003

Xeroderma pigmentosum (XP) is a skin cancer-prone autosomal recessive disease characterized by inability to repair UV-induced DNA damage. The major form of XP is defective in nucleotide excision repair (NER) and comprises seven complementation groups (A–G). The genes defective in all groups have been identified unambiguously with the exception of group E. The cells of some XP-E patients are deficient in a protein complex (consisting of two subunits: p127/DDBI and p48/DDB2) which binds to UV-damaged DNA (UV-DDB) and is specifically involved in the removal of photoproducts from the non-transcribed regions of the genome. However, other XP-E patients have been reported not to lack UV-damaged DNA binding activity (DDB+). Here we describe several genetically unrelated XP-E patients, not previously analyzed in depth, each carrying two mutated alleles for DDB2, causing either a single amino acid change or a protein truncation or internal deletion. These defects result in a severe decrease of detectable p48 protein, abolish interaction with the p127 subunit, and produce a deficiency in UV-DDB binding activity (DDB-). The role of p48 in the repair defect of these patients was demonstrated in vivo and in vitro. Investigation of four DDB+ cell strains from patients previously assigned to XP-E, allowed us to reclassify all of them into other groups and to show that they do not share the molecular and biochemical features typical for XP-E. Besides confirming that the true XP-E phenotype is DDB-, resulting from defects in a single gene, DDB2, our results identify the functional domains of the corresponding p48 protein.

* To whom correspondence should be addressed at: University of Pittsburgh, Scaife Hall, Suite 401, 3550 Terrace Street, Pittsburgh, PA 15261, USA. Tel: +1 4126488975; Fax: +1 4126481236; Email: alevine{at}hs.pitt.edu

{dagger} The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors.


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