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Human Molecular Genetics, Vol 5, 339-346, Copyright © 1996 by Oxford University Press


ARTICLES

A radiation hybrid map of the human genome

G Gyapay, K Schmitt, C Fizames, H Jones, N Vega-Czarny, D Spillett, D Muselet, JF Prud'Homme, C Dib, C Auffray, J Morissette, J Weissenbach and PN Goodfellow
CNRS URA 1922, Genethon, Evry, France.

We have developed a panel of whole-genome radiation hybrids by fusing irradiated diploid human fibroblasts with recipient hamster cells. This panel of 168 cell lines has been typed with microsatellite markers of known genetic location. Of 711 AFM genetic markers 404 were selected to construct a robust framework map that spans all the autosomes and the X chromosome. To demonstrate the utility of the panel, 374 expressed sequence tags (ESTs) previously assigned to chromosomes 1, 2, 14 and 16 were localized on this map. All of these ESTs could be positioned by pairwise linkage to one of the framework markers with a LOD score of greater than 8. The whole genome radiation hybrid panel described here has been used as the starting material for the Genebridge4 panel that is being made widely available for genome mapping projects.
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S. L. Bullock, J. M. Fletcher, R. S.P. Beddington, and V. A. Wilson
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BloodHome page
R. Kozyraki, M. Kristiansen, A. Silahtaroglu, C. Hansen, C. Jacobsen, N. Tommerup, P. J. Verroust, and S. K. Moestrup
The Human Intrinsic Factor-Vitamin B12 Receptor, Cubilin: Molecular Characterization and Chromosomal Mapping of the Gene to 10p Within the Autosomal Recessive Megaloblastic Anemia (MGA1) Region
Blood, May 15, 1998; 91(10): 3593 - 3600.
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W. Newell, S. Beck, H. Lehrach, and A. Lyall
Estimation of Distances and Map Construction Using Radiation Hybrids
Genome Res., May 1, 1998; 8(5): 493 - 508.
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E. A. Carver and L. Stubbs
Zooming in on the Human-Mouse Comparative Map: Genome Conservation Re-examined on a High-Resolution Scale
Genome Res., December 1, 1997; 7(12): 1123 - 1137.
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L. C. McCarthy, J. Terrett, M. E. Davis, C. J. Knights, A. L. Smith, R. Critcher, K. Schmitt, J. Hudson, N. K. Spurr, and P. N. Goodfellow
A First-Generation Whole Genome-Radiation Hybrid Map Spanning the Mouse Genome
Genome Res., December 1, 1997; 7(12): 1153 - 1161.
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I. H. Still, P. Vince, and J. K. Cowell
Direct isolation of human transcribed sequences from yeast artificial chromosomes through the application of RNA fingerprinting
PNAS, September 16, 1997; 94(19): 10373 - 10378.
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J. Villard, B. Lisowska-Grospierre, P. van den Elsen, A. Fischer, W. Reith, and B. Mach
Mutation of RFXAP, a Regulator of MHC Class II Genes, in Primary MHC Class II Deficiency
N. Engl. J. Med., September 11, 1997; 337(11): 748 - 753.
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M. Nagira, T. Imai, K. Hieshima, J. Kusuda, M. Ridanpaa, S. Takagi, M. Nishimura, M. Kakizaki, H. Nomiyama, and O. Yoshie
Molecular Cloning of a Novel Human CC Chemokine Secondary Lymphoid-Tissue Chemokine That Is a Potent Chemoattractant for Lymphocytes and Mapped to Chromosome 9p13
J. Biol. Chem., August 1, 1997; 272(31): 19518 - 19524.
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F. Bulle, N. Chiannilkulchai, A. Pawlak, J. Weissenbach, G. Gyapay, and G. Guellaen
Identification and Chromosomal Localization of Human Genes Containing CAG/CTG Repeats Expressed in Testis and Brain
Genome Res., July 1, 1997; 7(7): 705 - 715.
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D. Botstein and J. M. Cherry
Molecular linguistics: Extracting information from gene and protein sequences
PNAS, May 27, 1997; 94(11): 5506 - 5507.
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R. Yoshida, T. Imai, K. Hieshima, J. Kusuda, M. Baba, M. Kitaura, M. Nishimura, M. Kakizaki, H. Nomiyama, and O. Yoshie
Molecular Cloning of a Novel Human CC Chemokine EBI1-ligand Chemokine That Is a Specific Functional Ligand for EBI1, CCR7
J. Biol. Chem., May 23, 1997; 272(21): 13803 - 13809.
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E. A. Stewart, K. B. McKusick, A. Aggarwal, E. Bajorek, S. Brady, A. Chu, N. Fang, D. Hadley, M. Harris, S. Hussain, et al.
An STS-Based Radiation Hybrid Map of the Human Genome
Genome Res., May 1, 1997; 7(5): 422 - 433.
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G. D. Schuler
Sequence Mapping by Electronic PCR
Genome Res., May 1, 1997; 7(5): 541 - 550.
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K. Hieshima, T. Imai, G. Opdenakker, J. Van Damme, J. Kusuda, H. Tei, Y. Sakaki, K. Takatsuki, R. Miura, O. Yoshie, et al.
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Genome Res., January 1, 1997; 7(1): 59 - 64.
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A. Collins, J. Frezal, J. Teague, and N. E. Morton
A metric map of humans: 23,500 loci in 850 bands
PNAS, December 10, 1996; 93(25): 14771 - 14775.
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Hybrid selection as a method of increasing mapping power for radiation hybrids.
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S. Rajan, E. Wischmeyer, C. Karschin, R. Preisig-Muller, K.-H. Grzeschik, J. Daut, A. Karschin, and C. Derst
THIK-1 and THIK-2, a Novel Subfamily of Tandem Pore Domain K+ Channels
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