Human Molecular Genetics, Vol 7, 33-42, Copyright © 1998 by Oxford University Press
D Sternberg, C Danan, A Lombes, P Laforet, E Girodon, M Goossens and S Amselem
To gain a better understanding of the molecular basisof mitochondrial (mt)
encephalomyopathies, a highly heterogeneous condition, we developed a
denaturing gradient gel electrophoresis-based approach that allows rapid
and exhaustive screening for mutations of all 22 mt tRNA- encoding genes
and their flanking regions in large cohorts of patients. This method, that
detects heteroplasmy (i.e. co-existence of mutant and wild-type mtDNA
species in various ratios) directly, was applied to the investigation of 35
independent patients with a disease phenotype compatible with a
mitochondrial encephalomyopathy. Twenty-five of the 35 patients
investigated displayed a sequence variation in at least one tRNA gene. A
total of 46 different sequence variations (41 point mutations, four short
insertions and one short deletion), among which 20 are new, were
characterized. Forty of them were present in a homoplasmic state, whereas
six were heteroplasmic. Twenty-two were located in tRNA genes, among which
10 are new homoplasmic or heteroplasmic sequence variations; 24 were
located in flanking regions (12 in mRNA-encoding genes, seven of them
leading to missense sequence variations; two in rRNA genes; and 10 in
non-coding regions). This study demonstrates (i) the high frequency of
homoplasmic tRNA gene sequence variations in our patient sample, and (ii)
the existence of several polymorphic sites in tRNA gene regions that may be
helpful for defining haplogroups in different populations. It relies on a
screening method that can now be applied easily to other population
samples.
ARTICLES
Exhaustive scanning approach to screen all the mitochondrial tRNA genes for mutations and its application to the investigation of 35 independent patients with mitochondrial disorders
Service de Biochimie-INSERM U468, Hopital Henri Mondor, Av. du Mar- echal de Lattre de Tassigny, F-94010 Cr-eteil, France.
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