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Human Molecular Genetics Advance Access published online on April 28, 2004

Human Molecular Genetics, doi:10.1093/hmg/ddh140
© 2004 by Oxford University Press
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Gene expression profiles of transcripts in amyloid precursor protein transgenic mice: up-regulation of mitochondrial metabolism and apoptotic genes is an early cellular change in alzheimer's disease

P. Hemachandra Reddy 1*, Shannon McWeeney 2, Byung S. Park 2, Maria Manczak 1, Ramana V. Gutala 1, Dara Partovi 1, Jessica Jung 1, Vincent Yau 3, Robert Searles 4, Motomi Mori 2, Joseph Quinn 5

1 Neurogenetics Laboratory, Neurological Sciences Institute, Oregon Health and Science University, 505 NW 185th Avenue, Beaverton, OR 97006
2 Bioinformatics and Biostatistics Core, Gene Microarray Shared Resource, Oregon Health and Science University, 3181 S.W. Sam Jackson Park Rd, Portland, OR 97239; Division of Biostatistics, Department of Public Health and Preventive Medicine, Oregon Health and Science University, 3181 S.W. Sam Jackson Park Rd, Portland, OR 97239
3 Bioinformatics and Biostatistics Core, Gene Microarray Shared Resource, Oregon Health and Science University, 3181 S.W. Sam Jackson Park Rd, Portland, OR 97239
4 Spotted Microarray Core, Gene Microarray Shared Resource, Oregon Health and Science University, 505 NW 185th Avenue, Beaverton, OR 97006
5 Department of Neurology, Oregon Health and Science University, 3181 SW Sam Jackson Park Rd, Portland, OR 97201

* To whom correspondence should be addressed. E-mail: reddyh{at}ohsu.edu.


   Abstract

Alzheimer's disease (AD) is a progressive neurodegenerative disease characterized by the impairment of cognitive functions and by beta amyloid (Aß) plaques in the cerebral cortex and the hippocampus. Our objective was to determine genes that are critical for cellular changes in AD progression, with particular emphasis on changes early in disease progression. We investigated an established amyloid precursor protein (APP) transgenic mouse model (the Tg2576 mouse model) for gene expression profiles at 3 stages of disease progression: before (2 months of age), immediately before (5 months), and after (18 months) the appearance of Aß plaques. Using cDNA microarray techniques, we measured mRNA levels in 11,283 cDNA clones from the cerebral cortex of Tg2576 mice and age-matched wild-type (WT) mice at each of the 3 time points. This gene expression analysis revealed that the genes related to mitochondrial energy metabolism and apoptosis were up-regulated in 2-month-old Tg2576 mice and that the same genes were up-regulated at 5 and 18 months of age. These microarray results were confirmed using Northern blot analysis. Results from in situ hybridization of mitochondrial gene - ATPase 6, heat-shock protein 86, and programmed cell death gene 8 - suggest that the granule cells of the hippocampal dentate gyrus and the pyramidal neurons in the hippocampus and the cerebral cortex are up-regulated in Tg2576 mice compared to WT mice. Results from double-labeling in situ hybridization suggest that, in Tg2576 mice, only selective, over-expressed neurons with the mitochondrial gene ATPase-6 undergo oxidative damage. These results, therefore, suggest that mitochondrial energy metabolism is impaired by the expression of mutant APP and/or Aß, and that the up-regulation of mitochondrial genes is a compensatory response. These findings have important implications for understanding the mechanism of Aß toxicity in AD and for developing therapeutic strategies for AD.


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