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Human Molecular Genetics Advance Access published online on August 27, 2004

Human Molecular Genetics, doi:10.1093/hmg/ddh274
© 2004 by Oxford University Press
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Article

Analysis of DNA ligase IV mutations found in LIG4 syndrome patients: the impact of two linked polymorphisms

Pierre-Marie Girard 1, Boris Kysela 2, Christine J. Härer 3, Aidan J. Doherty 3, Penny A. Jeggo 3*

1 Genome Damage and Stability Centre, University of Sussex, East Sussex BN1 9RQ, UK; CNRS UMR 2027, Institut Curie, Centre Universitaire, F-91405 Orsay, France
2 Genome Damage and Stability Centre, University of Sussex, East Sussex BN1 9RQ, UK; Division of Reproductive and Child Health, Section of Medical and Molecular Genetics, The Medical School, University of Birmingham, Birmingham, B15 2TT, UK
3 Genome Damage and Stability Centre, University of Sussex, East Sussex BN1 9RQ, UK

* To whom correspondence should be addressed. E-mail: p.a.jeggo{at}sussex.ac.uk.


   Abstract

LIG4 syndrome patients have hypomorphic mutations in DNA ligase IV. Whilst four of the five identified patients display immunodeficiency and developmental delay, one patient was developmentally normal. The developmentally normal patient had the same homozygous mutation (R278H) in DNA ligase IV as one of the more severely affected patients, who additionally had two linked polymorphisms. Here, we examine the impact of the mutations and polymorphisms identified in the LIG4 syndrome patients. Examination of recombinant mutant proteins shows that the severity of the clinical features correlates with the level of residual ligase activity. The polymorphisms decrease the activity of DNA ligase IV approximately 2 fold. When combined with the otherwise mild R278H mutation, the activity is reduced to a level similar to other LIG4 patients that display immunodeficiency and developmental delay. This demonstrates how coupling of a mutation and polymorphism can have a marked impact on protein function and provides an example where a polymorphism may have influenced clinical outcome. Analysis of additional mutational changes in LIG4 syndrome (R580X, R814X and G469E) have led to the identification of a nuclear localisation signal (NLS) in DNA ligase IV and sites impacting upon DNA ligase IV adenylation.


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