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Human Molecular Genetics Advance Access published online on June 10, 2009

Human Molecular Genetics, doi:10.1093/hmg/ddp278
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© The Author 2009. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

Functional role for senataxin, defective in ataxia oculomotor apraxia type 2, in transcriptional regulation

Amila Suraweera1, YiChieh Lim1,2, Rick Woods1, Geoff W. Birrell1, Talat Nasim3, Olivier J. Becherel1 and Martin F. Lavin1,2,*

1 Radiation Biology and Oncology Laboratory, Queensland Institute of Medical Research, Brisbane, QLD 4029, Australia 2 University of Queensland, Centre for Clinical Research, QLD 4029, Australia 3 Department of Medical and Molecular Genetics, King's College London, Guy's Hospital, London SE1 9RT, UK

* Corresponding author: Prof. Martin F. Lavin Queensland Institute of Medical Research, PO Royal Brisbane Hospital, Brisbane, QLD 4029, Australia, Tel: +61(0)7-3362-0341, Fax: +61(0)7-3362-0106, e-mail: Martin.Lavin{at}qimr.edu.au

Received January 30, 2009; Revised May 19, 2009; Accepted June 8, 2009

Ataxia oculomotor apraxia type 2 (AOA2) is an autosomal recessive neurodegenerative disorder characterized by cerebellar ataxia and oculomotor apraxia. The gene mutated in AOA2, SETX, encodes senataxin, a putative DNA/RNA helicase which shares high homology to the yeast Sen1p protein and has been shown to play a role in the response to oxidative stress. To investigate further the function of senataxin, we identified novel senataxin interacting proteins, the majority of which are involved in transcription and RNA processing, including RNA polymerase II. Binding of RNA polymerase II to candidate genes was significantly reduced in senataxin deficient cells and this was accompanied by decreased transcription of these genes, suggesting a role for senataxin in the regulation/modulation of transcription. RNA polymerase II-dependent transcription termination was defective in cells depleted of senataxin in keeping with the observed interaction of senataxin with poly(A) binding proteins 1 and 2. Splicing efficiency of specific mRNAs and alternate splice-site selection of both endogenous genes and artificial minigenes were altered in senataxin depleted cells. These data suggest that senataxin, similar to its yeast homolog Sen1p, plays a role in coordinating transcriptional events, in addition to its role in DNA repair.


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